Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00033070 |
| length | 807 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 3 |
| gene id | XLOC_016919 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 51737097 ~ 51757328 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0003677 | DNA binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-2657 | Predicted to enable DNA binding activity and metal ion binding activity. Predicted to act upstream of or within negative regulation of activation of membrane attack complex. |
| ensembl_id | ENSDART00000171301 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033965 | lncRNA | downstream | 253937 | 51483547 ~ 51484324 (-) | True | XLOC_016909 |
| TCONS_00033417 | lncRNA | downstream | 261206 | 51473916 ~ 51477055 (-) | True | XLOC_016907 |
| TCONS_00033964 | lncRNA | downstream | 262843 | 51473913 ~ 51475418 (-) | False | XLOC_016907 |
| TCONS_00033963 | lncRNA | downstream | 328313 | 51409231 ~ 51409948 (-) | True | XLOC_016901 |
| TCONS_00033416 | lncRNA | downstream | 331135 | 51405600 ~ 51407126 (-) | True | XLOC_016900 |
| TCONS_00033077 | lncRNA | upstream | 10797 | 51752508 ~ 51757110 (-) | False | XLOC_016919 |
| TCONS_00033966 | lncRNA | upstream | 359279 | 52100990 ~ 52102594 (-) | False | XLOC_016925 |
| TCONS_00033967 | lncRNA | upstream | 359279 | 52100990 ~ 52103610 (-) | True | XLOC_016925 |
| TCONS_00033418 | lncRNA | upstream | 460408 | 52202119 ~ 52204072 (-) | True | XLOC_016926 |
| TCONS_00033968 | lncRNA | upstream | 723824 | 52465535 ~ 52468939 (-) | True | XLOC_016929 |
| TCONS_00033067 | mRNA | downstream | 18822 | 51669228 ~ 51719439 (-) | True | XLOC_016918 |
| TCONS_00033066 | mRNA | downstream | 37552 | 51665527 ~ 51700709 (-) | False | XLOC_016918 |
| TCONS_00033065 | mRNA | downstream | 94217 | 51640591 ~ 51644044 (-) | True | XLOC_016917 |
| TCONS_00033064 | mRNA | downstream | 103830 | 51614252 ~ 51634431 (-) | True | XLOC_016916 |
| TCONS_00033063 | mRNA | downstream | 107706 | 51613453 ~ 51630555 (-) | False | XLOC_016916 |
| TCONS_00033074 | mRNA | upstream | 9050 | 51750761 ~ 51757328 (-) | False | XLOC_016919 |
| TCONS_00033078 | mRNA | upstream | 23468 | 51765179 ~ 51772438 (-) | True | XLOC_016920 |
| TCONS_00033079 | mRNA | upstream | 32351 | 51774062 ~ 51777238 (-) | True | XLOC_016921 |
| TCONS_00033080 | mRNA | upstream | 48783 | 51790494 ~ 51794472 (-) | True | XLOC_016922 |
| TCONS_00033082 | mRNA | upstream | 146322 | 51888033 ~ 52020049 (-) | False | XLOC_016924 |
| TCONS_00033052 | other | downstream | 280033 | 51458113 ~ 51458228 (-) | True | XLOC_016905 |
| TCONS_00033050 | other | downstream | 308771 | 51429173 ~ 51429490 (-) | True | XLOC_016903 |
| TCONS_00033049 | other | downstream | 322450 | 51415503 ~ 51415811 (-) | True | XLOC_016902 |
| TCONS_00033026 | other | downstream | 1028779 | 50709366 ~ 50709482 (-) | True | XLOC_016882 |
| TCONS_00033024 | other | downstream | 1264719 | 50473426 ~ 50473542 (-) | True | XLOC_016880 |
| TCONS_00033073 | other | upstream | 4544 | 51746255 ~ 51749341 (-) | False | XLOC_016919 |
| TCONS_00033075 | other | upstream | 10364 | 51752075 ~ 51757110 (-) | False | XLOC_016919 |
| TCONS_00033076 | other | upstream | 10797 | 51752508 ~ 51757110 (-) | True | XLOC_016919 |
| TCONS_00033081 | other | upstream | 108446 | 51850157 ~ 51850271 (-) | True | XLOC_016923 |
| TCONS_00033102 | other | upstream | 2985595 | 54727306 ~ 54727426 (-) | True | XLOC_016947 |
