Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00002801 |
| length | 797 |
| lncRNA type | sense_over |
| GC content | 0.58 |
| exon number | 5 |
| gene id | XLOC_000014 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 218524 ~ 225137 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0006812 | cation transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0015299 | solute | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003002 | lncRNA | upstream | 64103 | 156792 ~ 157282 (+) | True | XLOC_000011 |
| TCONS_00000021 | lncRNA | upstream | 88170 | 127266 ~ 133215 (+) | False | XLOC_000008 |
| TCONS_00000023 | lncRNA | upstream | 90164 | 130627 ~ 131221 (+) | True | XLOC_000008 |
| TCONS_00000022 | lncRNA | upstream | 91794 | 127300 ~ 129591 (+) | False | XLOC_000008 |
| TCONS_00000017 | lncRNA | upstream | 182939 | 36727 ~ 38446 (+) | True | XLOC_000005 |
| TCONS_00002802 | lncRNA | downstream | 4449 | 227253 ~ 235533 (+) | False | XLOC_000015 |
| TCONS_00002803 | lncRNA | downstream | 13596 | 236400 ~ 237423 (+) | False | XLOC_000015 |
| TCONS_00002804 | lncRNA | downstream | 14587 | 237391 ~ 241707 (+) | True | XLOC_000015 |
| TCONS_00003003 | lncRNA | downstream | 132677 | 355481 ~ 358562 (+) | False | XLOC_000018 |
| TCONS_00003004 | lncRNA | downstream | 132967 | 355771 ~ 358562 (+) | True | XLOC_000018 |
| TCONS_00000028 | mRNA | upstream | 39127 | 176583 ~ 182258 (+) | False | XLOC_000013 |
| TCONS_00000029 | mRNA | upstream | 39127 | 176586 ~ 182258 (+) | True | XLOC_000013 |
| TCONS_00000027 | mRNA | upstream | 53987 | 158034 ~ 167398 (+) | True | XLOC_000012 |
| TCONS_00000026 | mRNA | upstream | 63249 | 157793 ~ 158136 (+) | False | XLOC_000012 |
| TCONS_00000025 | mRNA | upstream | 69387 | 144284 ~ 151998 (+) | True | XLOC_000010 |
| TCONS_00000031 | mRNA | downstream | 4437 | 227241 ~ 241707 (+) | False | XLOC_000015 |
| TCONS_00000032 | mRNA | downstream | 7559 | 230363 ~ 243798 (+) | False | XLOC_000015 |
| TCONS_00000033 | mRNA | downstream | 22272 | 245076 ~ 258138 (+) | True | XLOC_000016 |
| TCONS_00000034 | mRNA | downstream | 37235 | 260039 ~ 296055 (+) | False | XLOC_000017 |
| TCONS_00000035 | mRNA | downstream | 37235 | 260039 ~ 296057 (+) | False | XLOC_000017 |
| TCONS_00000003 | other | upstream | 208128 | 12129 ~ 13257 (+) | False | XLOC_000001 |
| TCONS_00000036 | other | downstream | 37236 | 260040 ~ 293894 (+) | False | XLOC_000017 |
| TCONS_00000047 | other | downstream | 291209 | 514013 ~ 515322 (+) | True | XLOC_000021 |
| TCONS_00000052 | other | downstream | 314785 | 537589 ~ 546217 (+) | False | XLOC_000023 |
| TCONS_00000053 | other | downstream | 353640 | 576444 ~ 576521 (+) | True | XLOC_000024 |
| TCONS_00000060 | other | downstream | 995887 | 1218691 ~ 1218805 (+) | True | XLOC_000029 |
