Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021608678.2 |
| length | 1436 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 5 |
| gene id | LOC110527417 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 17474265 ~ 17481968 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016491 | oxidoreductase activity | molecular_function |
| id | description |
|---|---|
| K13369 | HSD17B6; 17beta-estradiol 17-dehydrogenase / all-trans-retinol dehydrogenase (NAD+) / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU662416 | lncRNA | downstream | 7801 | 17466120 ~ 17466464 (-) | True | G580521 |
| TU662415 | lncRNA | downstream | 8431 | 17465589 ~ 17465834 (-) | True | G580520 |
| TU662378 | lncRNA | downstream | 80079 | 17393955 ~ 17394186 (-) | True | G580485 |
| TU662362 | lncRNA | downstream | 97091 | 17376930 ~ 17377174 (-) | True | G580471 |
| TU662361 | lncRNA | downstream | 98012 | 17375981 ~ 17376253 (-) | True | G580470 |
| TU662418 | lncRNA | upstream | 14759 | 17496727 ~ 17498970 (-) | False | G580523 |
| TU662420 | lncRNA | upstream | 14759 | 17496727 ~ 17498970 (-) | False | G580523 |
| TU662421 | lncRNA | upstream | 14759 | 17496727 ~ 17504537 (-) | True | G580523 |
| TU662422 | lncRNA | upstream | 23826 | 17505794 ~ 17506305 (-) | True | G580524 |
| TU662368 | lncRNA | upstream | 32407 | 17514375 ~ 17518475 (-) | True | G580475 |
| XM_036982837.1 | mRNA | downstream | 12053 | 17434219 ~ 17462212 (-) | True | LOC110527413 |
| XM_021608664.2 | mRNA | downstream | 12055 | 17431894 ~ 17462210 (-) | False | LOC110527413 |
| XM_021608665.2 | mRNA | downstream | 12055 | 17431894 ~ 17462210 (-) | False | LOC110527413 |
| XM_021608666.2 | mRNA | downstream | 12055 | 17431894 ~ 17462210 (-) | False | LOC110527413 |
| XM_036982835.1 | mRNA | downstream | 14027 | 17431894 ~ 17460238 (-) | False | LOC110527413 |
| XM_021608675.2 | mRNA | upstream | 54350 | 17536318 ~ 17662496 (-) | False | LOC110527416 |
| XM_021608676.2 | mRNA | upstream | 54350 | 17536318 ~ 17662496 (-) | False | LOC110527416 |
| XM_021608677.2 | mRNA | upstream | 54350 | 17536318 ~ 17662496 (-) | False | LOC110527416 |
| XR_005052540.1 | mRNA | upstream | 60908 | 17542876 ~ 17662496 (-) | False | LOC110527416 |
| XR_005052541.1 | mRNA | upstream | 60909 | 17542877 ~ 17662496 (-) | False | LOC110527416 |
| TU662381 | other | downstream | 73729 | 17397857 ~ 17400536 (-) | True | G580487 |
| TU661518 | other | downstream | 673579 | 16797782 ~ 16800686 (-) | True | LOC110527396 |
| TU661517 | other | downstream | 673643 | 16797680 ~ 16800622 (-) | False | LOC110527396 |
| TU661516 | other | downstream | 673643 | 16797782 ~ 16800622 (-) | False | LOC110527396 |
| TU661132 | other | downstream | 913120 | 16559963 ~ 16561145 (-) | False | LOC110528867 |
| TU663064 | other | upstream | 560959 | 18042927 ~ 18043380 (-) | True | G581089 |
| TU663175 | other | upstream | 735190 | 18217158 ~ 18235038 (-) | True | G581174 |
| TU665792 | other | upstream | 2733681 | 20215649 ~ 20249985 (-) | True | G583661 |
| TU666686 | other | upstream | 3290899 | 20772867 ~ 20778065 (-) | True | otos2 |
| TU666669 | other | upstream | 3356520 | 20838488 ~ 20839336 (-) | False | LOC110527470 |
