Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021608691.2 |
| length | 1172 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 11 |
| gene id | LOC110527429 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 18178455 ~ 18193482 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0001878 | response to yeast | biological_process |
| GO:0000502 | proteasome complex | cellular_component |
| GO:0003984 | acetolactate synthase activity | molecular_function |
| id | description |
|---|---|
| K03030 | PSMD14, RPN11, POH1; 26S proteasome regulatory subunit N11 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU663125 | lncRNA | downstream | 55958 | 18121847 ~ 18122497 (-) | True | G581136 |
| TU663124 | lncRNA | downstream | 57417 | 18120246 ~ 18121038 (-) | True | G581135 |
| TU663123 | lncRNA | downstream | 59530 | 18118636 ~ 18118925 (-) | True | G581134 |
| TU663114 | lncRNA | downstream | 70377 | 18107874 ~ 18108078 (-) | True | G581125 |
| TU663113 | lncRNA | downstream | 70586 | 18107594 ~ 18107869 (-) | True | G581124 |
| TU663162 | lncRNA | upstream | 1660 | 18195142 ~ 18195304 (-) | False | LOC110528804 |
| TU663163 | lncRNA | upstream | 3486 | 18196968 ~ 18197313 (-) | True | LOC110528804 |
| TU663143 | lncRNA | upstream | 50886 | 18244368 ~ 18299083 (-) | False | LOC100170202 |
| TU663142 | lncRNA | upstream | 103177 | 18296659 ~ 18299083 (-) | True | LOC100170202 |
| TU663261 | lncRNA | upstream | 191230 | 18384712 ~ 18395937 (-) | True | LOC110527435 |
| XM_021608690.2 | mRNA | downstream | 1503 | 18173554 ~ 18176952 (-) | True | LOC110527428 |
| XM_036982851.1 | mRNA | downstream | 14453 | 18123948 ~ 18164002 (-) | True | LOC110527425 |
| XM_036982852.1 | mRNA | downstream | 14455 | 18123948 ~ 18164000 (-) | False | LOC110527425 |
| XM_036982853.1 | mRNA | downstream | 18543 | 18123948 ~ 18159912 (-) | False | LOC110527425 |
| XM_021608685.2 | mRNA | downstream | 88184 | 18079991 ~ 18090271 (-) | True | LOC110527423 |
| XM_036982856.1 | mRNA | upstream | 542 | 18194024 ~ 18199581 (-) | False | LOC110528804 |
| XM_021608698.2 | mRNA | upstream | 52505 | 18245987 ~ 18256261 (-) | True | LOC110527433 |
| XM_021608697.2 | mRNA | upstream | 58755 | 18252237 ~ 18254010 (-) | True | LOC110527432 |
| NM_001129982.1 | mRNA | upstream | 104036 | 18297518 ~ 18298064 (-) | False | LOC100170202 |
| XM_021608699.2 | mRNA | upstream | 106909 | 18300391 ~ 18311994 (-) | True | LOC110527434 |
| TU663064 | other | downstream | 135075 | 18042927 ~ 18043380 (-) | True | G581089 |
| TU662381 | other | downstream | 777919 | 17397857 ~ 17400536 (-) | True | G580487 |
| TU661518 | other | downstream | 1377769 | 16797782 ~ 16800686 (-) | True | LOC110527396 |
| TU661517 | other | downstream | 1377833 | 16797680 ~ 16800622 (-) | False | LOC110527396 |
| TU663175 | other | upstream | 23676 | 18217158 ~ 18235038 (-) | True | G581174 |
| TU665792 | other | upstream | 2022167 | 20215649 ~ 20249985 (-) | True | G583661 |
| TU666686 | other | upstream | 2579385 | 20772867 ~ 20778065 (-) | True | otos2 |
| TU666669 | other | upstream | 2645006 | 20838488 ~ 20839336 (-) | False | LOC110527470 |
| TU667558 | other | upstream | 3227972 | 21421454 ~ 21424585 (-) | True | G585240 |
