Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU668423 |
| length | 329 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 1 |
| gene id | LOC110527508 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 22290515 ~ 22312038 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU668421 | lncRNA | upstream | 22375 | 22289047 ~ 22289335 (+) | True | G586031 |
| TU668240 | lncRNA | upstream | 80869 | 22229724 ~ 22230841 (+) | True | G585855 |
| TU668239 | lncRNA | upstream | 81651 | 22227672 ~ 22230059 (+) | False | G585855 |
| TU668201 | lncRNA | upstream | 125566 | 22162860 ~ 22186144 (+) | True | G585818 |
| TU668133 | lncRNA | upstream | 233463 | 22078042 ~ 22078247 (+) | True | G585757 |
| TU668433 | lncRNA | downstream | 3442 | 22315480 ~ 22315719 (+) | True | G586043 |
| TU668434 | lncRNA | downstream | 3705 | 22315743 ~ 22316002 (+) | True | G586044 |
| TU668435 | lncRNA | downstream | 4107 | 22316145 ~ 22316373 (+) | True | G586045 |
| TU668437 | lncRNA | downstream | 5038 | 22317076 ~ 22349230 (+) | True | G586047 |
| TU668471 | lncRNA | downstream | 56635 | 22368673 ~ 22370163 (+) | True | G586079 |
| XM_021608818.2 | mRNA | upstream | 485685 | 21812987 ~ 21826025 (+) | False | sts |
| XM_021608819.2 | mRNA | upstream | 485685 | 21815880 ~ 21826025 (+) | True | sts |
| XM_036982998.1 | mRNA | upstream | 486824 | 21813020 ~ 21824886 (+) | False | sts |
| XM_021608817.2 | mRNA | upstream | 521531 | 21762128 ~ 21790179 (+) | True | LOC110527503 |
| XM_021608816.2 | mRNA | upstream | 530174 | 21762128 ~ 21781536 (+) | False | LOC110527503 |
| XM_021608825.2 | mRNA | downstream | 15533 | 22327571 ~ 22347037 (+) | True | mxra5a |
| XM_021608827.2 | mRNA | downstream | 44462 | 22356500 ~ 22360232 (+) | False | c7h10orf53 |
| XM_036983001.1 | mRNA | downstream | 73832 | 22385870 ~ 22416150 (+) | False | LOC118936317 |
| XM_021608840.2 | mRNA | downstream | 80615 | 22392653 ~ 22416150 (+) | False | LOC118936317 |
| XR_005052551.1 | mRNA | downstream | 80644 | 22392682 ~ 22410880 (+) | False | LOC118936317 |
| TU667948 | other | upstream | 358441 | 21953029 ~ 21953269 (+) | True | G585573 |
| TU666895 | other | upstream | 1229095 | 21080828 ~ 21082615 (+) | True | G584643 |
| TU665732 | other | upstream | 2071913 | 20238911 ~ 20239797 (+) | True | G583605 |
| TU665478 | other | upstream | 2289983 | 20017855 ~ 20021727 (+) | False | LOC110528807 |
| TU664011 | other | upstream | 3334711 | 18976678 ~ 18976999 (+) | True | G581976 |
| TU668464 | other | downstream | 44545 | 22356583 ~ 22360227 (+) | True | c7h10orf53 |
| TU668616 | other | downstream | 374451 | 22686489 ~ 22687846 (+) | False | LOC110527523 |
| TU668622 | other | downstream | 389156 | 22701194 ~ 22703821 (+) | True | LOC110527523 |
| TU669156 | other | downstream | 698023 | 23010061 ~ 23015120 (+) | True | G586685 |
| TU670005 | other | downstream | 1299314 | 23611352 ~ 23621369 (+) | False | LOC110527540 |
