Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021609001.2 |
| length | 1026 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 5 |
| gene id | atp5mc3b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 28617128 ~ 28619938 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0015986 | ATP synthesis coupled proton transport | biological_process |
| GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008289 | lipid binding | molecular_function |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K02128 | ATPeF0C, ATP5G, ATP9; F-type H+-transporting ATPase subunit c |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU677512 | lncRNA | downstream | 58793 | 28557230 ~ 28558335 (-) | True | G594377 |
| TU677511 | lncRNA | downstream | 60219 | 28555894 ~ 28556909 (-) | True | G594376 |
| TU677510 | lncRNA | downstream | 62095 | 28553792 ~ 28555033 (-) | True | G594375 |
| TU677535 | lncRNA | downstream | 70188 | 28546740 ~ 28546940 (-) | True | G594400 |
| TU677529 | lncRNA | downstream | 77921 | 28538950 ~ 28539207 (-) | True | G594394 |
| TU677558 | lncRNA | upstream | 37146 | 28657084 ~ 28657386 (-) | True | G594423 |
| TU677559 | lncRNA | upstream | 38322 | 28658260 ~ 28658569 (-) | True | G594424 |
| TU677564 | lncRNA | upstream | 46002 | 28665940 ~ 28666289 (-) | True | G594429 |
| TU677573 | lncRNA | upstream | 66232 | 28686170 ~ 28686779 (-) | True | G594438 |
| TU677491 | lncRNA | upstream | 69775 | 28689713 ~ 28690610 (-) | True | G594356 |
| XM_036983107.1 | mRNA | downstream | 1485 | 28581188 ~ 28615643 (-) | True | LOC110527604 |
| XM_036983108.1 | mRNA | downstream | 1535 | 28581188 ~ 28615593 (-) | False | LOC110527604 |
| XM_021608999.2 | mRNA | downstream | 1560 | 28581188 ~ 28615568 (-) | False | LOC110527604 |
| XM_021609000.2 | mRNA | downstream | 1560 | 28581188 ~ 28615568 (-) | False | LOC110527604 |
| XM_036983109.1 | mRNA | downstream | 13271 | 28581188 ~ 28603857 (-) | False | LOC110527604 |
| XM_036983112.1 | mRNA | upstream | 7451 | 28627389 ~ 28646188 (-) | False | lnpk |
| XM_036983119.1 | mRNA | upstream | 7451 | 28627389 ~ 28646865 (-) | False | lnpk |
| XM_036983117.1 | mRNA | upstream | 7451 | 28627389 ~ 28647038 (-) | False | lnpk |
| XM_036983118.1 | mRNA | upstream | 7451 | 28627389 ~ 28647039 (-) | False | lnpk |
| XM_036983116.1 | mRNA | upstream | 7451 | 28627389 ~ 28647043 (-) | False | lnpk |
| TU675224 | other | downstream | 1133348 | 27482957 ~ 27483780 (-) | True | G592298 |
| TU674725 | other | downstream | 1450660 | 27166175 ~ 27166468 (-) | True | G591808 |
| TU674230 | other | downstream | 2031621 | 26578169 ~ 26585507 (-) | True | LOC110527590 |
| TU673308 | other | downstream | 2458823 | 26157993 ~ 26158305 (-) | True | G590443 |
| TU672491 | other | downstream | 3071710 | 25544735 ~ 25545418 (-) | True | G589705 |
| TU677787 | other | upstream | 404469 | 29024407 ~ 29026049 (-) | True | G594636 |
| TU677925 | other | upstream | 796917 | 29416855 ~ 29495130 (-) | False | G594762 |
| TU678069 | other | upstream | 948263 | 29568201 ~ 29593462 (-) | True | G594900 |
| TU678077 | other | upstream | 970055 | 29589993 ~ 29625899 (-) | False | G594905 |
| TU678078 | other | upstream | 976078 | 29596016 ~ 29599570 (-) | True | G594905 |
