RNA id: XM_021609004.2


Basic Information

Item Value
RNA id XM_021609004.2
length 1393
RNA type mRNA
GC content 0.47
exon number 10
gene id mtx2
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 28666416 ~ 28686793 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

AATTTGGAGCAGGAAAAACAGGCGCGTCGTACCACTGCGTCTGACGTCACCTTTATGACTCTACGCTAAGCGTGCCCTTAACCTTGTTTGCCACATTTTATTTTACACCATTCTGGATTGAATTTCTGTCCGATTTCATCATGTCTCTTGCTGCAGAGGCATTCGTCTCCCAGATAGCAgCTGCGGAGCCATGGCCTGAAAATGCCACCTTGTATCAGCCTCTGAGAGAGGATCAGATACTACTATCAGATTGTGCATCATCACTTGCTGTACAGGCTTATCTGAGGATGTGCAATCTGCCTGTTCATGTGTCCTGTCGGTCAAACGCAGAGTACATGTCCCCATCTGGTAAAGTCCcctttgtccatgtgggaaatcAGGTTGTGTCTGAGCTGGGGCCCATAGTCCAGTTTACCAAGGCAAAGGGTCACTCTCTCAGTGATGGTCTGGATGACGTTCAGAGGGCTGAAATGAAAGCCTACATGGAGCTGGTCAACAACATGCTGCTCACCGCTGAGTTGTATATCCAGTGGTGTGATGATACCACGGCGACTGAGATCTCCAGGCCGAGATACAGCAGCCCATACTCCTGGCCCCTCAACCAAATCCTGGCCTATCAGAAGCAGTGGGAGGTCCGTCGTAAGATGAATGCCATTGGCTGGGCAGGGAAGAGCCTGGAGCAGGTTTATGAAGATGTTAGCCAATGCTGTCAAGCTCTTTCCCAGAGGCTGGGCACACAGCCATACTTCTTCAATAAGCAACCCACTGAGCTGGATGCGCTGGTGTTCGGCCACCTCTTCACCATCCTGACCACACGACTCACCAGCGACGAGCTGGGCGAGAAGATCAAGAGCTACAGCAACCTGCTGGCCTTCTGCCGCCGCATCGAGCAGAGCTATTTCGAGGACAGCCAAGCTGGCTCCTCGTCCAGAGGCTATTCGAAAGGCCCCTCCCTCTTTTGATGCCCATCACCTGAAGCCCAACAGTCCCATTCCATCtccatcccatcctatcctacCCCATTCCCAGTCTTCCTTTCTCCACTTGCTTGCCTGTGAATGCCATGAACTGGAAGTAGGACTTTCTTGAAAATGTAGTGGTGATTCTTTGATGTAGAAACTAAATGAAAAGCAATTGTGATTTATTTTTTCCAGATTGTGCAGTTTTTTTTCTGGTTTGATATTTGAATGGAAAGTGCCTACAAAAATACAATTCCACACACAACTCTTATTCTTCACAATTTATGGTTTCTATTTAGAAGTGTGAGCTTAGTATTAAAACAAGTTAAGTATGAAATTCACAGATGTACCATGTTATTATCATGCTTGTGGAAAACCTTGAAGCACTTTCAAGAATTACAAATAAAAAGTGAAAGTAACATCTGTACCATTAA

Function

GO:

id name namespace
GO:0006626 protein targeting to mitochondrion biological_process
GO:0005741 mitochondrial outer membrane cellular_component

KEGG:

id description
K17776 MTX; metaxin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU676044 lncRNA upstream 11562 28654223 ~ 28654854 (+) True G593051
TU676039 lncRNA upstream 18960 28647256 ~ 28647456 (+) True G593046
TU676018 lncRNA upstream 48082 28610618 ~ 28618334 (+) False G593028
TU676020 lncRNA upstream 48082 28616247 ~ 28618334 (+) False G593028
TU676017 lncRNA upstream 48082 28617181 ~ 28618334 (+) False G593028
TU676052 lncRNA downstream 1417 28688210 ~ 28688881 (+) True G593059
TU676087 lncRNA downstream 42614 28729407 ~ 28729613 (+) True G593093
TU676105 lncRNA downstream 57828 28744621 ~ 28744909 (+) True G593111
TU676093 lncRNA downstream 87787 28774580 ~ 28780095 (+) True LOC110527611
TU676129 lncRNA downstream 136146 28822939 ~ 28823223 (+) True G593135
XM_021608995.2 mRNA upstream 298386 28306267 ~ 28368030 (+) False LOC110527602
XM_036983105.1 mRNA upstream 298386 28306267 ~ 28368030 (+) True LOC110527602
XM_036983104.1 mRNA upstream 407974 28221625 ~ 28258442 (+) True LOC118965275
XM_021608991.2 mRNA upstream 498215 28145540 ~ 28168201 (+) True LOC100653476
XM_036983103.1 mRNA upstream 501197 28145536 ~ 28165219 (+) False LOC100653476
XM_021609008.2 mRNA downstream 67683 28754476 ~ 28769421 (+) False LOC110527611
XM_021609009.2 mRNA downstream 67683 28754476 ~ 28769421 (+) False LOC110527611
XR_002474145.2 mRNA downstream 67683 28754476 ~ 28780185 (+) False LOC110527611
XR_002474146.2 mRNA downstream 67683 28754476 ~ 28780185 (+) False LOC110527611
XM_021609024.2 mRNA downstream 225847 28912640 ~ 28921397 (+) True LOC110527622
TU675449 other upstream 791995 27854006 ~ 27874421 (+) True plekha3
TU675374 other upstream 959122 27703583 ~ 27707294 (+) True G592445
TU675056 other upstream 1182620 27483050 ~ 27483796 (+) True G592134
TU673831 other upstream 2088483 26577407 ~ 26577933 (+) True G590949
TU673811 other upstream 2112874 26552554 ~ 26553542 (+) True G590936
TU676138 other downstream 148416 28835209 ~ 28841083 (+) True G593144
TU676166 other downstream 205370 28892163 ~ 28892425 (+) True G593171
TU676297 other downstream 372905 29059698 ~ 29064592 (+) True G593283
TU676195 other downstream 642879 29329672 ~ 29363351 (+) True LOC110527619
TU676564 other downstream 841234 29528027 ~ 29528910 (+) True G593513

Expression Profile