Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021609203.2 |
| length | 712 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 6 |
| gene id | LOC110527735 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 39370730 ~ 39376856 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005840 | ribosome | cellular_component |
| id | description |
|---|---|
| K02947 | RP-S10e, RPS10; small subunit ribosomal protein S10e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU689131 | lncRNA | upstream | 14939 | 39355519 ~ 39355791 (+) | True | G605079 |
| TU689129 | lncRNA | upstream | 16812 | 39353629 ~ 39353918 (+) | True | G605077 |
| TU689115 | lncRNA | upstream | 31580 | 39338866 ~ 39339150 (+) | True | G605063 |
| TU689072 | lncRNA | upstream | 37093 | 39325121 ~ 39333637 (+) | False | G605027 |
| TU689073 | lncRNA | upstream | 37093 | 39325121 ~ 39333637 (+) | True | G605027 |
| TU689162 | lncRNA | downstream | 30518 | 39407374 ~ 39407581 (+) | True | G605110 |
| TU689163 | lncRNA | downstream | 32273 | 39409129 ~ 39409333 (+) | True | G605111 |
| TU689173 | lncRNA | downstream | 46340 | 39423196 ~ 39423407 (+) | True | G605121 |
| TU689178 | lncRNA | downstream | 51606 | 39428462 ~ 39429112 (+) | True | G605126 |
| TU689181 | lncRNA | downstream | 56811 | 39433667 ~ 39434028 (+) | True | LOC110527736 |
| XM_021609194.2 | mRNA | upstream | 60496 | 39291656 ~ 39310234 (+) | False | LOC110527730 |
| XM_021609196.2 | mRNA | upstream | 60496 | 39301703 ~ 39310234 (+) | True | LOC110527730 |
| XM_021609195.2 | mRNA | upstream | 62088 | 39291656 ~ 39308642 (+) | False | LOC110527730 |
| XM_021609193.2 | mRNA | upstream | 130522 | 39228705 ~ 39240208 (+) | True | LOC110527729 |
| XM_021609192.2 | mRNA | upstream | 132251 | 39228701 ~ 39238479 (+) | False | LOC110527729 |
| XM_021609206.2 | mRNA | downstream | 56333 | 39433189 ~ 39773724 (+) | False | LOC110527736 |
| XM_021609216.2 | mRNA | downstream | 615910 | 39992766 ~ 40027458 (+) | False | LOC110527739 |
| XM_021609219.2 | mRNA | downstream | 906697 | 40283553 ~ 40287403 (+) | True | csrp1b |
| XM_021608251.2 | mRNA | downstream | 915184 | 40292040 ~ 40296179 (+) | False | tnni1b |
| XM_021608252.2 | mRNA | downstream | 915186 | 40292042 ~ 40296179 (+) | False | tnni1b |
| TU688229 | other | upstream | 779436 | 38584474 ~ 38591294 (+) | False | G604258 |
| TU688169 | other | upstream | 871068 | 38499031 ~ 38499662 (+) | True | G604207 |
| TU686155 | other | upstream | 2279974 | 37089624 ~ 37090756 (+) | True | G602295 |
| TU685500 | other | upstream | 2794658 | 36573887 ~ 36576072 (+) | True | LOC110527686 |
| TU684077 | other | upstream | 4399325 | 34971128 ~ 34971405 (+) | True | G600531 |
| TU690507 | other | downstream | 749678 | 40126534 ~ 40134450 (+) | False | G606400 |
| TU690574 | other | downstream | 829713 | 40206569 ~ 40206897 (+) | True | G606452 |
| TU690586 | other | downstream | 846319 | 40223175 ~ 40224171 (+) | True | G606464 |
| TU690594 | other | downstream | 854029 | 40230885 ~ 40231225 (+) | True | G606469 |
| TU690810 | other | downstream | 1062244 | 40439100 ~ 40440632 (+) | True | LOC110527751 |
