Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001171853.1 |
| length | 1296 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 3 |
| gene id | cish |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 43487093 ~ 43491299 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0035556 | intracellular signal transduction | biological_process |
| GO:0016567 | protein ubiquitination | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU695159 | lncRNA | downstream | 9521 | 43477270 ~ 43477573 (-) | True | G610579 |
| TU695043 | lncRNA | downstream | 15854 | 43470962 ~ 43471240 (-) | True | G610502 |
| TU695041 | lncRNA | downstream | 17180 | 43469706 ~ 43469914 (-) | True | G610500 |
| TU695036 | lncRNA | downstream | 33688 | 43453115 ~ 43453406 (-) | True | G610495 |
| TU695033 | lncRNA | downstream | 36607 | 43450201 ~ 43450487 (-) | True | G610492 |
| TU695818 | lncRNA | upstream | 109011 | 43599887 ~ 43600118 (-) | True | G611167 |
| TU695896 | lncRNA | upstream | 175831 | 43666707 ~ 43667658 (-) | True | G611214 |
| TU695898 | lncRNA | upstream | 177537 | 43668413 ~ 43668921 (-) | True | G611215 |
| TU695960 | lncRNA | upstream | 277482 | 43768358 ~ 43768591 (-) | True | G611275 |
| TU696122 | lncRNA | upstream | 543620 | 44034496 ~ 44034844 (-) | True | G611423 |
| XM_021609334.2 | mRNA | downstream | 20809 | 43457395 ~ 43466285 (-) | False | zmynd10 |
| XM_021609335.2 | mRNA | downstream | 20809 | 43457395 ~ 43466285 (-) | True | zmynd10 |
| XM_021609336.2 | mRNA | downstream | 28901 | 43439214 ~ 43458193 (-) | True | LOC110527811 |
| XM_021609337.2 | mRNA | downstream | 38019 | 43439214 ~ 43449075 (-) | False | LOC110527811 |
| XM_021609341.2 | mRNA | downstream | 48018 | 43436880 ~ 43439076 (-) | False | LOC110527812 |
| XM_036983287.1 | mRNA | upstream | 2010 | 43492886 ~ 43504866 (-) | False | LOC110527813 |
| XM_036983285.1 | mRNA | upstream | 2010 | 43492886 ~ 43506472 (-) | False | LOC110527813 |
| XM_036983286.1 | mRNA | upstream | 2010 | 43492886 ~ 43506472 (-) | True | LOC110527813 |
| NM_001165230.2 | mRNA | upstream | 20665 | 43511541 ~ 43514743 (-) | True | wdr82 |
| XM_021609348.2 | mRNA | upstream | 35826 | 43526702 ~ 43537037 (-) | False | LOC110527816 |
| TU695010 | other | downstream | 48181 | 43436883 ~ 43438913 (-) | False | LOC110527812 |
| TU695007 | other | downstream | 48282 | 43436883 ~ 43438812 (-) | False | LOC110527812 |
| TU695009 | other | downstream | 48282 | 43436883 ~ 43438812 (-) | False | LOC110527812 |
| TU695019 | other | downstream | 48351 | 43435578 ~ 43438743 (-) | False | LOC110527812 |
| TU695150 | other | upstream | 35815 | 43526691 ~ 43536965 (-) | False | LOC110527816 |
| TU695151 | other | upstream | 35815 | 43526691 ~ 43536965 (-) | False | LOC110527816 |
| TU695152 | other | upstream | 35815 | 43526691 ~ 43536965 (-) | False | LOC110527816 |
| TU695153 | other | upstream | 35815 | 43526691 ~ 43536965 (-) | False | LOC110527816 |
| TU695154 | other | upstream | 35815 | 43526691 ~ 43536965 (-) | True | LOC110527816 |
