Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036983299.1 |
| length | 1161 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 4 |
| gene id | ppcs |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 43964477 ~ 43966869 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016874 | ligase activity | molecular_function |
| id | description |
|---|---|
| K01922 | PPCS, COAB; phosphopantothenate---cysteine ligase (ATP) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU695367 | lncRNA | upstream | 92021 | 43867202 ~ 43872623 (+) | True | G610764 |
| TU695209 | lncRNA | upstream | 132764 | 43829838 ~ 43831880 (+) | False | G610622 |
| TU695210 | lncRNA | upstream | 132764 | 43830860 ~ 43831880 (+) | True | G610622 |
| TU695217 | lncRNA | upstream | 290869 | 43623596 ~ 43673775 (+) | False | G610627 |
| TU695491 | lncRNA | downstream | 92238 | 44059107 ~ 44064534 (+) | True | G610879 |
| TU695493 | lncRNA | downstream | 93499 | 44060368 ~ 44066058 (+) | True | G610881 |
| TU695502 | lncRNA | downstream | 102773 | 44069642 ~ 44071873 (+) | False | G610889 |
| TU695503 | lncRNA | downstream | 102773 | 44069642 ~ 44071873 (+) | False | G610889 |
| TU695504 | lncRNA | downstream | 102773 | 44069642 ~ 44071873 (+) | True | G610889 |
| XM_036983292.1 | mRNA | upstream | 382333 | 43567660 ~ 43582311 (+) | False | si:dkey-183j2.10 |
| XM_021609349.2 | mRNA | upstream | 382333 | 43576834 ~ 43582311 (+) | True | si:dkey-183j2.10 |
| XM_036983288.1 | mRNA | upstream | 418827 | 43538583 ~ 43545817 (+) | False | mon1bb |
| XR_002474165.2 | mRNA | downstream | 35687 | 44002556 ~ 44028120 (+) | False | si:dkey-264d12.5 |
| XM_021609372.2 | mRNA | downstream | 35687 | 44002556 ~ 44035143 (+) | False | si:dkey-264d12.5 |
| XM_021609373.2 | mRNA | downstream | 35688 | 44002557 ~ 44034649 (+) | False | si:dkey-264d12.5 |
| XM_021609368.2 | mRNA | downstream | 35688 | 44002557 ~ 44035143 (+) | False | si:dkey-264d12.5 |
| XM_021609369.2 | mRNA | downstream | 35688 | 44002557 ~ 44035143 (+) | False | si:dkey-264d12.5 |
| TU695211 | other | upstream | 132764 | 43829004 ~ 43831880 (+) | False | G610622 |
| TU695128 | other | upstream | 379748 | 43584020 ~ 43584896 (+) | True | G610563 |
| TU694950 | other | upstream | 553838 | 43410391 ~ 43410806 (+) | True | G610436 |
| TU693833 | other | upstream | 1143399 | 42820956 ~ 42821245 (+) | True | G609436 |
| TU692673 | other | upstream | 2133836 | 41827211 ~ 41830808 (+) | True | G608390 |
| TU695454 | other | downstream | 35755 | 44002624 ~ 44006907 (+) | False | si:dkey-264d12.5 |
| TU695458 | other | downstream | 54980 | 44021849 ~ 44028228 (+) | True | si:dkey-264d12.5 |
| TU698525 | other | downstream | 2311865 | 46278734 ~ 46279333 (+) | True | G613664 |
| TU699203 | other | downstream | 2665253 | 46632122 ~ 46637954 (+) | True | LOC110528958 |
| TU700614 | other | downstream | 3872519 | 47839388 ~ 47839722 (+) | True | G615624 |
