RNA id: XM_036983306.1


Basic Information

Item Value
RNA id XM_036983306.1
length 1653
RNA type mRNA
GC content 0.54
exon number 9
gene id znf362a
representative False

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 44071609 ~ 44083797 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GGAGCGAGGCACCAGGGGGGGATCAGAGTTGCTCTGCAGTCAAAATTATCTTTGTGATGTGTTAGCGTTTTAAATTCtaaaggtttttattttattttggatcTGCAAATAAACGTAGACGTCCAGATAGAATAAGGAAAAGATGGCTGAACCTCGTTTTAATAATCCCTACTTCTGGCCCCCACCACCCAACATGCCTGGCCAGCTGGATAACCTTGTGTTGATCAACAAGATCAAGGAACAGCTGATGGCTGAGAAGATCAGACCGCCTCACCTGCCGTCTTCCACAGTTCCCTCCCAACAGCAACTGCTGGGGAATCCTACACAGACAGAAGCTGGGCAGCATGTCCAGATGTCAGTTGAGAAACTGCAGCAGATGCAACAAGAACTCCATGCCCACAGCCCGTCCCATCCAGACATTGCCCTGCACGCCCGGCCAGCCTCCAGCTCTGTTGCAGGACGTATTCTTGGTGATGTAAACTTTAATCTGGATGATAAAACAGCTATAAAAGCTAGAGGATTGTGGGAAGACTGGCATTTGCGTCAAATCATAGACCAACCCTCTAGAACGAACCACCTGTCAGGTCTGCCACTTTCCTCTCGAATGGGCAACCATAACACCTCAGAGGCCGTCACTCTGACCACACCCACCTCCAATAGTCTGAGCCGACTAGGCGGAGCCCCCTCACCACATCATGTCCTCTCAGGCTTGGCCAGTGGCCCTGGGATGGAGCAAATCAAAAGTAACGGAGGCCTTGCTGGACTGCTGGGGCCCCCTCCCAAGATGGAGGGGCGAGGGCGTAAGAAGATAAAAGCTGAGAACGGTGGTGGCTCTCTGTTGGTGGTGCCTTACCCAATCCTCGCTTCAGGCAACGACCAATCCTGCCACACCGTCACCCCCAAACAGGGCAAATGCTACAGGTGTAAATCGTGCCCACTGACCTTCTTCTCCAAGTCAGACATGCAGATCCACTCCAAGTCCCACACAGAGGCCAAGCCTCACAAGTGTCCTCACTGCTCCAAATCCTTCGCCAACGCATCCTACCTGGCCCAGCACCTCCGCATACACCTGGGCGTCAAACCTTATCACTGCTCCTACTGCGAGAAATGCTTCCGCCAACTCTCCCACCTGCAGCAGCACACCAGGATTCACACTGGAGATCGGCCCTATAAATGTGCCCATCCAGGTTGTGAAAAAGCCTTCACTCAGCTCTCCAATCTGCAGtctcatcagAGACAGCACAACAAAGACAAGCCCTACAAGTGTCCGAACTGCTACCGTGCCTACTCGGACTCCGCCTCACTGCAGATCCACTTGTCTGCGCATGCCATCAAAAACGCCAAGGCCTACTGCTGCAGCATGTGTGGCAGAGCCTACACCTCAGAGACCTACCTTATGAAGCACATGTCCAAACACACGGTGGTGGAACACCTGGTGAGCCATCACTCTCCACAAAGGACGGAGTCTCCCAGTATCCCCATACGGATCTCCCTCATCTGAGCACTTCGCCCTAACACCCTATCCTGACACCCTGCCCTGACACCCTACCCCTGACACCCTACCCCTGACACCCTATCCTGACACCCTTCCCTGACACCCTACCCCTGACACCCTACCCCTGACACCCTACCCCTGACACCCTACCCCTGACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU696122 lncRNA downstream 36765 44034496 ~ 44034844 (-) True G611423
TU695960 lncRNA downstream 303018 43768358 ~ 43768591 (-) True G611275
TU695898 lncRNA downstream 402688 43668413 ~ 43668921 (-) True G611215
TU695896 lncRNA downstream 403951 43666707 ~ 43667658 (-) True G611214
TU695818 lncRNA downstream 471491 43599887 ~ 43600118 (-) True G611167
TU696169 lncRNA upstream 53233 44136185 ~ 44178737 (-) True LOC110527840
TU696170 lncRNA upstream 105893 44188845 ~ 44191529 (-) True G611470
TU696186 lncRNA upstream 117596 44200548 ~ 44200845 (-) True G611486
TU696189 lncRNA upstream 122509 44205461 ~ 44205666 (-) True G611489
TU696199 lncRNA upstream 140499 44223451 ~ 44223726 (-) True G611499
XM_021609377.2 mRNA downstream 2270 44056546 ~ 44069339 (-) False LOC110527833
XM_036983301.1 mRNA downstream 2270 44056546 ~ 44069339 (-) True LOC110527833
XM_021609376.2 mRNA downstream 2271 44056546 ~ 44069338 (-) False LOC110527833
XM_036983302.1 mRNA downstream 2271 44056546 ~ 44069338 (-) False LOC110527833
XM_036983303.1 mRNA downstream 2271 44056546 ~ 44069338 (-) False LOC110527833
XM_021609380.2 mRNA upstream 20882 44103834 ~ 44145946 (-) False LOC110527835
XM_036983311.1 mRNA upstream 20882 44103834 ~ 44145955 (-) False LOC110527835
XM_021609379.2 mRNA upstream 20882 44103834 ~ 44145958 (-) False LOC110527835
XM_036983309.1 mRNA upstream 20882 44103834 ~ 44145966 (-) False LOC110527835
XM_036983310.1 mRNA upstream 20882 44103834 ~ 44145967 (-) True LOC110527835
TU695139 other downstream 491645 43579093 ~ 43579964 (-) True G610570
TU695151 other downstream 534644 43526691 ~ 43536965 (-) False LOC110527816
TU696390 other upstream 401903 44484855 ~ 44485405 (-) False G611674
TU696391 other upstream 401903 44484855 ~ 44485752 (-) False G611674
TU698246 other upstream 1792013 45874965 ~ 45875700 (-) True G613411
TU700211 other upstream 3185371 47268323 ~ 47270071 (-) True LOC110527888
TU701964 other upstream 4404095 48487047 ~ 48529168 (-) True G616880

Expression Profile