Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00034194 |
| length | 1263 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 9 |
| gene id | XLOC_017150 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007131.7 |
| NCBI id | CM002904.2 |
| chromosome length | 55201332 |
| location | 9128256 ~ 9148323 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0046854 | phosphatidylinositol phosphorylation | biological_process |
| GO:0046855 | inositol phosphate dephosphorylation | biological_process |
| GO:0008441 | 3'(2'),5'-bisphosphate nucleotidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040718-46 | Predicted to enable 3'(2'),5'-bisphosphate nucleotidase activity. Predicted to act upstream of or within inositol phosphate dephosphorylation and phosphatidylinositol phosphate biosynthetic process. Is expressed in intestinal bulb. Orthologous to human BPNT1 (3'(2'), 5'-bisphosphate nucleotidase 1). |
| ensembl_id | ENSDART00000064144 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00036371 | lncRNA | upstream | 121493 | 8998775 ~ 9007336 (+) | True | XLOC_017148 |
| TCONS_00036370 | lncRNA | upstream | 131366 | 8996867 ~ 8997463 (+) | True | XLOC_017147 |
| TCONS_00036544 | lncRNA | upstream | 1051110 | 8071324 ~ 8077719 (+) | True | XLOC_017144 |
| TCONS_00036369 | lncRNA | upstream | 1226541 | 7901956 ~ 7902288 (+) | True | XLOC_017142 |
| TCONS_00036543 | lncRNA | upstream | 1588687 | 7533716 ~ 7540142 (+) | True | XLOC_017139 |
| TCONS_00034209 | lncRNA | downstream | 634617 | 9782940 ~ 9791721 (+) | False | XLOC_017160 |
| TCONS_00034211 | lncRNA | downstream | 648765 | 9797088 ~ 9801542 (+) | True | XLOC_017160 |
| TCONS_00036545 | lncRNA | downstream | 803241 | 9951564 ~ 9953982 (+) | True | XLOC_017162 |
| TCONS_00036546 | lncRNA | downstream | 919612 | 10067935 ~ 10068758 (+) | True | XLOC_017163 |
| TCONS_00036547 | lncRNA | downstream | 1073092 | 10221415 ~ 10225073 (+) | True | XLOC_017165 |
| TCONS_00034189 | mRNA | upstream | 3166 | 9124369 ~ 9125663 (+) | True | XLOC_017149 |
| TCONS_00034186 | mRNA | upstream | 1060856 | 8028613 ~ 8067973 (+) | True | XLOC_017143 |
| TCONS_00034185 | mRNA | upstream | 1327487 | 7799615 ~ 7801342 (+) | True | XLOC_017141 |
| TCONS_00034184 | mRNA | upstream | 1535723 | 7584211 ~ 7593106 (+) | True | XLOC_017140 |
| TCONS_00034183 | mRNA | upstream | 1535818 | 7584211 ~ 7593011 (+) | False | XLOC_017140 |
| TCONS_00034196 | mRNA | downstream | 62914 | 9211237 ~ 9216772 (+) | True | XLOC_017151 |
| TCONS_00034197 | mRNA | downstream | 75191 | 9223514 ~ 9239037 (+) | True | XLOC_017152 |
| TCONS_00034198 | mRNA | downstream | 128976 | 9277299 ~ 9301208 (+) | True | XLOC_017153 |
| TCONS_00034200 | mRNA | downstream | 207589 | 9355912 ~ 9421263 (+) | False | XLOC_017155 |
| TCONS_00034202 | mRNA | downstream | 326518 | 9474841 ~ 9568005 (+) | False | XLOC_017156 |
| TCONS_00034188 | other | upstream | 132848 | 8993860 ~ 8995981 (+) | True | XLOC_017146 |
| TCONS_00034187 | other | upstream | 194306 | 8934408 ~ 8934523 (+) | True | XLOC_017145 |
| TCONS_00034181 | other | upstream | 1787635 | 7341078 ~ 7341194 (+) | True | XLOC_017137 |
| TCONS_00034180 | other | upstream | 1797499 | 7327813 ~ 7331330 (+) | True | XLOC_017136 |
| TCONS_00034173 | other | upstream | 2208965 | 6919748 ~ 6919864 (+) | True | XLOC_017131 |
| TCONS_00034199 | other | downstream | 151111 | 9299434 ~ 9299549 (+) | True | XLOC_017154 |
| TCONS_00034201 | other | downstream | 207647 | 9355970 ~ 9358130 (+) | True | XLOC_017155 |
| TCONS_00034205 | other | downstream | 571798 | 9720121 ~ 9722138 (+) | True | XLOC_017158 |
| TCONS_00034207 | other | downstream | 615044 | 9763367 ~ 9768749 (+) | True | XLOC_017159 |
| TCONS_00034217 | other | downstream | 1341298 | 10489621 ~ 10489890 (+) | True | XLOC_017166 |
