RNA id: TCONS_00034205


Basic Information

Item Value
RNA id TCONS_00034205
length 634
RNA type processed_transcript
GC content 0.42
exon number 2
gene id XLOC_017158
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 9720121 ~ 9722138 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AaaggtggagctgcaccaggagacctCCTAAGCCCAGAGGTGGAGCTGCAACCGAAGACCACTGAGcccagaggtggagctgcaccaggagacccactgatcgaaaaggtggagctacacctAGAGCGGTTGTAGTTTCAAGCACTGTCAAGAGAGGGAAAAAGGAGCAGAAGGTTGTTCTGGAGATGTCCAAATCATTCTTGTTCTGAAATGGAGAACCAGAAACAAAATGGATTTTTAGAAAACTTTTACATTAATGACACATCTTTTAAAGGAGTTCAGAAAGTCACTGAAGATCACAAGTGACAGTTTTTAATTCAAGGTTTTAATTTTCTTTCACTGATTATAACAGTGAACCACATGCTACaccaaacattttaaacatacaTAAATTTATTGCAAAAATCCCTAGCAtagctaaaaaataaagtgaaggTTCTGGATGCAGATGTGGTGCAGAGCAATCTGGGCTGCACCAATGtgttttaatgggctcacctaactctacccctaaccctaccggtgacagtgacgtcactagctccatttgagtgcattgtgtatgacattgcatcgctgagtgatacagtctcagcttgcatcataaaggctgcatccagatactattgaaata

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000145323

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00034193 lncRNA upstream 579571 9128829 ~ 9140550 (+) False XLOC_017150
TCONS_00036371 lncRNA upstream 712785 8998775 ~ 9007336 (+) True XLOC_017148
TCONS_00036370 lncRNA upstream 722658 8996867 ~ 8997463 (+) True XLOC_017147
TCONS_00036544 lncRNA upstream 1642402 8071324 ~ 8077719 (+) True XLOC_017144
TCONS_00036369 lncRNA upstream 1817833 7901956 ~ 7902288 (+) True XLOC_017142
TCONS_00034209 lncRNA downstream 60802 9782940 ~ 9791721 (+) False XLOC_017160
TCONS_00034211 lncRNA downstream 74950 9797088 ~ 9801542 (+) True XLOC_017160
TCONS_00036545 lncRNA downstream 229426 9951564 ~ 9953982 (+) True XLOC_017162
TCONS_00036546 lncRNA downstream 345797 10067935 ~ 10068758 (+) True XLOC_017163
TCONS_00036547 lncRNA downstream 499277 10221415 ~ 10225073 (+) True XLOC_017165
TCONS_00034204 mRNA upstream 25455 9683994 ~ 9694666 (+) True XLOC_017157
TCONS_00034202 mRNA upstream 152116 9474841 ~ 9568005 (+) False XLOC_017156
TCONS_00034203 mRNA upstream 153262 9519391 ~ 9566859 (+) True XLOC_017156
TCONS_00034200 mRNA upstream 298858 9355912 ~ 9421263 (+) False XLOC_017155
TCONS_00034198 mRNA upstream 418913 9277299 ~ 9301208 (+) True XLOC_017153
TCONS_00034206 mRNA downstream 41226 9763364 ~ 9776334 (+) False XLOC_017159
TCONS_00034208 mRNA downstream 59794 9781932 ~ 9823810 (+) False XLOC_017160
TCONS_00034210 mRNA downstream 63814 9785952 ~ 9794316 (+) False XLOC_017160
TCONS_00034212 mRNA downstream 106631 9828769 ~ 9848953 (+) False XLOC_017161
TCONS_00034213 mRNA downstream 106739 9828877 ~ 9846873 (+) False XLOC_017161
TCONS_00034201 other upstream 361991 9355970 ~ 9358130 (+) True XLOC_017155
TCONS_00034199 other upstream 420572 9299434 ~ 9299549 (+) True XLOC_017154
TCONS_00034188 other upstream 724140 8993860 ~ 8995981 (+) True XLOC_017146
TCONS_00034187 other upstream 785598 8934408 ~ 8934523 (+) True XLOC_017145
TCONS_00034181 other upstream 2378927 7341078 ~ 7341194 (+) True XLOC_017137
TCONS_00034207 other downstream 41229 9763367 ~ 9768749 (+) True XLOC_017159
TCONS_00034217 other downstream 767483 10489621 ~ 10489890 (+) True XLOC_017166
TCONS_00034225 other downstream 1001589 10723727 ~ 10729279 (+) False XLOC_017170
TCONS_00034232 other downstream 2876499 12598637 ~ 12605833 (+) True XLOC_017178
TCONS_00034240 other downstream 3453663 13175801 ~ 13309410 (+) False XLOC_017186