RNA id: XM_021609872.2


Basic Information

Item Value
RNA id XM_021609872.2
length 4203
RNA type mRNA
GC content 0.45
exon number 6
gene id nuak2
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58640045 ~ 58655578 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TATTTCCAAGTTCCCCGTTGTCTGGAAAGCATCATGAAGCTCACACGCCTCCTGGTAAAAACAACAGCAAATGGGCAACGATGCCTGTTTATTGGATATTCAAATAGGAGGAGTGGTCACCTTCATCGACTTCATGAAACCAACACAGGAAACAAGGAAGGCTACCTGAGGAAGAGTATATACAACAAACtacatgttttaaatgtgttataTTTGTATAGTCTAGTCATTCAACTGTAGGAGAAATAAAAAGTGGTTGCAATCTATAATGGATCCTAACGATTTCAACAGTGGTGGGCGATCATCAACTTTATCCGACAATGGACAACAGTCACCTGGTCATGGCCACTCGCTTGTTAGAAAATCGGTCTCCGAGGCATCCGTGAAAAGGCAAGCGGTGAAGAGACATCATCATAAACACAATCTGAAGCATCGGTATGAATTTCTTGAAACTCTTGGAAAAGGGACTTACGGAAAAGTGAAGAAAGCAATCGAGAGATCCGGTAGAATGGTTGCCATTAAGTCCATCAGAAAGGAGAAGATCCAGGATGAGCAGGACCTAGTGCACATTCGCAGAGAGATTGAGATCATGTCCTCACTCAATCACCCCTACATCATCACCATATATGAAGTGTTCGAGAACAAGGACAAGATTGTGATTGTGATGGAGTATGCTAGCCGAGGTGACCTTTACGACTACATCTCTGAAAAGCAGAGGATCTCAGAACGCGAGGCCAGACACTTCTTCAGACAAATCGTGTCAGCTGTACACTACTGCCACAGGAATGGGATAGTACATCGGGACTTGAAGCTGGAGAACATTTTACTAGATGGAAAGGGCAATATTAAGATTGCTGACTTTGGGCTGTCCAACCTGTACCGTGGTGATGAGTACCTGCAGACGTTTTGTGGCAGCCCTCTGTATGCTTCTCCAGAGATCGTTAACGGGCGGCCGTACAAAGGGCCCGAGGTGGACACCTGGTCGCTGGGTGTTCTGCTCTACACCCTGGTCCATGGTGCCATGCCTTTCGATGGGCAAAACTACAAGAACCTGGTCCAACAGATTAGCACTGGAAACTACCGCAAACCCACCAACCCTTCAGATGCCTGTGGGCTGATTCGTTGGATGCTAATGGTAAATCCTGAGCGCAGAGCTACCATAGAGGAGATCGCTGGACACTGGTGGCTCAACTGGGGTTACCAGAAACCCCTACTGGCCGAGGGTGAGAATGCGACATTGCTACAACCAAGTGAGAAGACCACTGCATCCACACAGCAGCCTGGAGGCCTTGCCAGCATTGCCAGTTGGCTGCGTCGAAACTCCCGGCCCTTACTGGAGAACAGCTCCAAGGTGCGCTGTCTGCTGCGGTCCCACGGGAGCGGTGGAGGGGATGTGGTGCGTCAGCGGTCCCTACGGAGGTCACGCAAGGAGAACAACGTGTCCCAGACCATGAATGATGGGGCCACCGCTCGGCCCTCCAAGGGCATACTGAAGAGACGAGGTAGCCTGAAGCAGAAGGCCCTCAGCGAGGCTACAACCTCAGTGATGGAGGAACCAGTGAGGGACTATGAACTCTCCACCCCGGCCCAGCCCCTGCCTGTTGCATCACTGCCCCGCAAAGGCATCTTGAAGAAACCAGCCGAGCGAGAGTCTGGCTACTACTCTTCCTCCCCAGACAGCAGTGACTCTGCCCAGACACCCCAGGCCCAGCTCTGCCCCTCAGCACCGCCCCACCGAAAGGGAATCCTGAAGCGCCATGGTAAGTTCTCTTCAGGCCTACTGCAGGAGTTTGGGTCTCTGGACCAGCTGGCGGCCTCCCTGCCAAGGGGGGGCACGAGAGCACGACCCAGCGGGGCAATCAGCGAGGACAGCATCCTCTCCTCGGAGTCCTTTGACCAGCTGGATCTGCCTGACCGCGTGGGGCCAGAGGCACCCAGCGAACGCCCAGCCAAGGGCACCATGAGGGGCTGCGTGTCTGCTGACAACCTCCTGGACATCCGAGAAGAGGGGCTTGGGCAAGACCTGCTGAGGCAGAGAGGACCCTGGGACATGGCCTGTTACCAGTCTGGGGTGGCTGACAGCGCTTTCTCCATCACAGACTGTGAGAACGTGACAGAAGCCTACAAGCATGCCATGGTGATCGGAGGAGCTGCAGCCAGCTGAGGACCAGCAAGTGTCCCAGGACAGTATAATACAGCATTCTCAAAGGACTGAGGCAGTTGTTTAAAGTTGGCTGATAGCTGAACACATTTGTGGTAATGTGTGACTTGATAGCCAAAGTGGTATAGGAGAAGTGCGAAGCTACAGTAGCCACTCGTGATGTGACATTGTTTTGATGCAGTACTATAAGAACTTTACCAAAAACAGATTCTAGCAAAGGGAGAAAGAATCTAGGCTCATATCAGACTTATTGCTAGTTTAGACAAACATTGTAAAATAAATGCCTTTCAATTAGTTAACTAGATCAGAGGTTTGAGTTATTcccatttttttgtttctttgcCAGGGATATCCAGACTTCAATACAATATTTTCTTTCAGGGACTAAATGTTTAGTCAGAAAAACAGTGTTTTTCAAAAATATTGGTAGCTGTTAATTGTGACATTTTGTCTGGACCAAGTTccaattgactttggggggtttTCAATGTTGACTTTTGGATTTTGATTTCAAAATGTAGCATTTTTGTTCAGGGTTTGAGGGAATTGACAGTTTAATACCAAAGCTAAAATGTGAAAACATGTAGAGCACTATTTTTTTCTCTGTCCAATCACCATGTTAATAAGACAGATTCATCTGGGCCTACAGAGTCTACTACTGACTGTTATGGTTAAACTTTTAGAACTGGAATTGATTTACACATGGAAAGATGACTCACAATAATAAGTAATGGTAATAATGACAtccattaaaggggcaatctgcagttggtACATCCATTATTAAACATTTAAATGAATGATGAATATAACTTATAGATGCCTCAtcagcttagttcaactgtcgtaccccatcagaacccaaaatatgagCTTGTTATACTCCTTTTGttttaaacaatgtaaatgtaaactgaAACTAATCTTgaaatcatggatggtcagtccctttATACATAGCTCTGTACattttgagtggttacatttctccagccccacccctcagctgtttaccgGGTTACCGCTTTATTGTTcaaactgcagattgcccctttaagccCTGAGGCACACTAGCACGAACTTGTCTAACCTGCTACTATTCTATTCAGCCTAAGTTTACTCTGTGTACAGTGCATTTCAGATGAAAACGGGGGTTTACAGTAAATGTTCCTCAGTCTTTTGGCGGGTTAAGTATTGTAGCAGTATTCCAGTTGTTCTCTGGAATTAAACCATGATCTTTAGCATGTGTGGTAACTAGTTAATGTGTAACTTCCCCAGAGTGAACTGAAGAACTAGTTCAGACCGATATGTGACATTTTTATGAGTTAATGAATTTACAAGGACGGGTCTAAAGGTGCGTTTCGGTTTCCCAGTAACAGCATGTGGCCAAAGACTGGTATTTGCAACTTTGATGTGCCCTCTGGGCATTTCATGATTATGACTAGGATCGATTCAATTTATTCTGTTTTAACACCTAAACATGATTAATACTATGAAAAATTGTGCCTAGGAGCTGCTCAGACTATTGAAATCTGATAATTATATAAAATGTTTCAGGGTTCACTTGAATGTGGAACAAACTGCACACAGAGCTTTGCACAAGGGGCTACAACATCAAGTTGCTGTTCAATGACTGGAATGTGGTGATTTCTTATTGTTGGTTATTAATAGGTTGATTTTATATTTAACACTGTAGGGATAAAGGGAAATAGAACTATTTTTAGTAGTATACAAGAGCGATCAACAAAGGAGGTTAAAACACAAAGATATTCACACTTTGATGCTCAAACAGATTCAGGTGattattttttccccccctcaGTATTATACAGGAACTACAAAATGTTCATACAGTTCCATTAAGTGACCTATCCAGGCCCGTCTTGTTAGCCAACTCAACCATAATATGTTGCCATGTTAATAAATACAGGTAAATGTAAGCAATTTGTTTTTCATGAGTTGGACATGATCCATGTTTGCCAAAGTGCCTGGCTTATCTGTTGTCGACTTGGCCAAgtaaatcattaaaaaaaaaatgaaat

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08800 NUAK; NUAK family, SNF1-like kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU714544 lncRNA upstream 16715 58622608 ~ 58623335 (+) True G628458
TU714543 lncRNA upstream 19824 58619967 ~ 58620226 (+) True G628457
TU714537 lncRNA upstream 29682 58610111 ~ 58610368 (+) True G628451
TU714455 lncRNA upstream 49703 58590098 ~ 58590347 (+) True G628371
TU714516 lncRNA upstream 72972 58566575 ~ 58567078 (+) True G628432
TU714574 lncRNA downstream 57319 58712897 ~ 58718648 (+) True G628476
TU714576 lncRNA downstream 187702 58843280 ~ 58852652 (+) True G628478
TU714698 lncRNA downstream 235550 58891128 ~ 58894932 (+) True G628566
TU714704 lncRNA downstream 250849 58906427 ~ 58906692 (+) True G628572
TU715385 lncRNA downstream 263581 58919159 ~ 58920449 (+) True LOC110528092
XM_036983628.1 mRNA upstream 51049 58502199 ~ 58589001 (+) False LOC110528980
XM_036983626.1 mRNA upstream 51049 58502200 ~ 58589001 (+) False LOC110528980
XM_036983627.1 mRNA upstream 51049 58502200 ~ 58589001 (+) False LOC110528980
XM_036983629.1 mRNA upstream 51049 58502200 ~ 58589001 (+) False LOC110528980
XM_036983630.1 mRNA upstream 54770 58502198 ~ 58585280 (+) False LOC110528980
LOC110528982 mRNA downstream 9964 58665542 ~ 58668251 (+) True LOC110528982
XM_021609874.2 mRNA downstream 15485 58671063 ~ 58677554 (+) False LOC110528081
XM_021609878.2 mRNA downstream 15485 58671063 ~ 58677554 (+) False LOC110528081
XM_021609875.2 mRNA downstream 15708 58671286 ~ 58677554 (+) False LOC110528081
XM_021609877.2 mRNA downstream 15708 58671286 ~ 58677554 (+) True LOC110528081
TU714457 other upstream 135973 58503550 ~ 58504077 (+) True LOC110528980
TU714108 other upstream 648178 57918034 ~ 57991872 (+) False LOC110528055
TU712995 other upstream 1043999 57579050 ~ 57596051 (+) False G627035
TU714554 other downstream 52717 58708295 ~ 58713584 (+) False G628468
TU714555 other downstream 52717 58708295 ~ 58713584 (+) True G628468
TU715451 other downstream 362767 59018345 ~ 59022847 (+) True LOC110528095
TU715602 other downstream 413092 59068670 ~ 59084729 (+) True LOC110528099
TU715988 other downstream 1028753 59684331 ~ 59684763 (+) True G629678

Expression Profile