Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU718877 |
| length | 249 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 2 |
| gene id | LOC110528164 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 61542003 ~ 61557188 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004990 | oxytocin receptor activity | molecular_function |
| GO:0005000 | vasopressin receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU718867 | lncRNA | downstream | 28353 | 61527756 ~ 61528029 (-) | True | G632356 |
| TU718849 | lncRNA | downstream | 64251 | 61488767 ~ 61492131 (-) | True | G632340 |
| TU718455 | lncRNA | downstream | 103750 | 61451587 ~ 61452632 (-) | True | G631978 |
| TU718344 | lncRNA | downstream | 172988 | 61383073 ~ 61383394 (-) | True | G631868 |
| TU718343 | lncRNA | downstream | 174277 | 61381892 ~ 61382105 (-) | True | G631867 |
| TU718937 | lncRNA | upstream | 66870 | 61624037 ~ 61624341 (-) | True | G632423 |
| TU718941 | lncRNA | upstream | 75513 | 61632680 ~ 61633563 (-) | True | G632427 |
| TU718965 | lncRNA | upstream | 101257 | 61658424 ~ 61658686 (-) | True | G632450 |
| TU718968 | lncRNA | upstream | 104652 | 61661819 ~ 61662023 (-) | True | G632453 |
| TU718975 | lncRNA | upstream | 135649 | 61692816 ~ 61693145 (-) | True | G632460 |
| NM_001124525.1 | mRNA | downstream | 319387 | 61235479 ~ 61236995 (-) | False | gpx1 |
| XM_021609984.2 | mRNA | downstream | 369532 | 61181265 ~ 61186850 (-) | False | LOC110528157 |
| XR_002474204.2 | mRNA | downstream | 391717 | 61158940 ~ 61164665 (-) | True | LOC110528156 |
| XR_005052712.1 | mRNA | downstream | 397521 | 61156718 ~ 61158861 (-) | True | LOC118965385 |
| XM_036983704.1 | mRNA | downstream | 427865 | 61055389 ~ 61128517 (-) | True | LOC110528155 |
| XM_036983708.1 | mRNA | upstream | 77030 | 61634197 ~ 61749981 (-) | False | LOC110528165 |
| XM_021609992.2 | mRNA | upstream | 77031 | 61634198 ~ 61749981 (-) | False | LOC110528165 |
| XR_005052626.1 | mRNA | upstream | 77680 | 61634847 ~ 61749981 (-) | True | LOC110528165 |
| XM_036983709.1 | mRNA | upstream | 243511 | 61800678 ~ 61921139 (-) | False | LOC110528991 |
| XM_036983710.1 | mRNA | upstream | 243511 | 61800678 ~ 61921139 (-) | False | LOC110528991 |
| TU718160 | other | downstream | 356944 | 61198007 ~ 61199438 (-) | True | G631687 |
| TU718213 | other | downstream | 365337 | 61190708 ~ 61191045 (-) | True | G631740 |
| TU717562 | other | downstream | 808283 | 60738495 ~ 60748099 (-) | False | LOC110528989 |
| TU717152 | other | downstream | 1472525 | 60083046 ~ 60083857 (-) | True | G630747 |
| TU716579 | other | downstream | 1638831 | 59915979 ~ 59917551 (-) | True | G630227 |
| TU718974 | other | upstream | 134081 | 61691248 ~ 61691644 (-) | True | G632459 |
| TU719566 | other | upstream | 664105 | 62221272 ~ 62221678 (-) | False | G632994 |
| TU719571 | other | upstream | 664105 | 62221272 ~ 62222050 (-) | False | G632994 |
| TU719986 | other | upstream | 951052 | 62508219 ~ 62520510 (-) | True | LOC118965309 |
| TU720546 | other | upstream | 1449608 | 63006775 ~ 63008040 (-) | True | si:dkey-28n18.9 |
