RNA id: LOC118965402



Basic Information


Item Value
RNA id LOC118965402
length 101
RNA type mRNA
GC content 0.42
exon number 1
gene id LOC118965402
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 83155619 ~ 83155719 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tttgtGCCATTCTGAAAAAAGTGTTAGTTATGGagcagagaagattagcatggcacatgcgaaaggatgacacgcaaatccgtgaagcgctccttattttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU745824 lncRNA upstream 245 83155151 ~ 83155374 (+) True G656124
TU745817 lncRNA upstream 4982 83150399 ~ 83150637 (+) True G656117
TU745795 lncRNA upstream 20412 83134905 ~ 83135207 (+) True G656097
TU745787 lncRNA upstream 22177 83131149 ~ 83133442 (+) True G656091
TU745778 lncRNA upstream 30413 83124897 ~ 83125206 (+) True G656086
TU745968 lncRNA downstream 107225 83262944 ~ 83263175 (+) True G656261
TU745969 lncRNA downstream 108646 83264365 ~ 83264618 (+) True G656262
TU745973 lncRNA downstream 112639 83268358 ~ 83273217 (+) True G656265
TU746006 lncRNA downstream 140424 83296143 ~ 83296394 (+) True G656288
TU746036 lncRNA downstream 176075 83331794 ~ 83332039 (+) True G656318
XM_021605164.2 mRNA upstream 372697 82778373 ~ 82782922 (+) True LOC110525199
XM_021605169.2 mRNA upstream 377576 82773777 ~ 82778043 (+) True LOC110525202
XM_036984225.1 mRNA upstream 390854 82354401 ~ 82764765 (+) False dock3
XM_036984464.1 mRNA downstream 109817 83265536 ~ 83310372 (+) True LOC118965370
XM_021610760.2 mRNA downstream 398564 83554283 ~ 83616043 (+) False dag1
XM_036984238.1 mRNA downstream 399508 83555227 ~ 83616043 (+) True dag1
XM_021611193.2 mRNA downstream 555642 83711361 ~ 83712203 (+) True LOC110529053
XM_036984240.1 mRNA downstream 604019 83759738 ~ 83782465 (+) False nicn1
TU744537 other upstream 695952 82459085 ~ 82459667 (+) True G655042
TU744236 other upstream 1204227 81951002 ~ 81951392 (+) True G654782
TU744059 other upstream 1346892 81767225 ~ 81808727 (+) True G654673
TU743930 other upstream 1580196 81574942 ~ 81575423 (+) True G654603
TU743539 other upstream 1804419 81326323 ~ 81351200 (+) False G654265
TU745825 other downstream 295 83156014 ~ 83156319 (+) True G656125
TU745971 other downstream 111429 83267148 ~ 83272209 (+) True G656264
TU746281 other downstream 403118 83558837 ~ 83560518 (+) True G656551
TU747043 other downstream 1347830 84503549 ~ 84520418 (+) True G657228
TU747071 other downstream 1396277 84551996 ~ 84554773 (+) True G657254

Expression Profile