RNA id: TU650682


Basic Information

Item Value
RNA id TU650682
length 290
lncRNA type antisense_over
GC content 0.47
exon number 2
gene id G570844
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8002510 ~ 8003004 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TGACAGTCTTACGACTCCAGGTAACATCAAGCAGTAACAGCCCTGACAGTCTTACGACTCCAGGTAACATCAAGCAGTAACAGCCCTGACAGTCTTACGACTCCAGGTAATATCAAGCAGTAACAGCCCTGACAGTCTTACGACTCCAGGTAACATCAAGCAGTAACAGCCCTGACAGTCTTACGACTCCAGGTAACATCAAGCAGTAACAGCCCTGACAGAAAAGACAGTTGCATCACCTCCTTAAAAGTGTACACCGCTTTCTTCTGTGTTCTCTTGCTGTGTAAAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU650669 lncRNA upstream 10883 7985881 ~ 7991703 (+) True G570836
TU650637 lncRNA upstream 15112 7976933 ~ 7987474 (+) True G570821
TU650650 lncRNA downstream 6583 8009587 ~ 8061480 (+) False LOC110497026
TU650662 lncRNA downstream 13575 8016579 ~ 8017366 (+) True LOC110504762
TU650692 lncRNA downstream 20623 8023627 ~ 8023872 (+) True G570854
TU650652 lncRNA downstream 60103 8063107 ~ 8071558 (+) False G570827
TU650655 lncRNA downstream 60103 8063107 ~ 8071558 (+) False G570827
XM_036982356.1 mRNA upstream 67870 7900629 ~ 7934716 (+) False LOC110495467
XM_036982366.1 mRNA downstream 5928 8008932 ~ 8017366 (+) False LOC110504762
XM_036982367.1 mRNA downstream 6088 8009092 ~ 8017160 (+) False LOC110504762
XM_036982368.1 mRNA downstream 15429 8018433 ~ 8060835 (+) False LOC110497026
XM_036982369.1 mRNA downstream 15429 8018433 ~ 8060835 (+) False LOC110497026
XM_036982402.1 mRNA downstream 250722 8253726 ~ 8301029 (+) False LOC110528741
TU650514 other upstream 71214 7929788 ~ 7931372 (+) False LOC110495467
TU650510 other upstream 71214 7929853 ~ 7931372 (+) False LOC110495467
TU650554 other upstream 176246 7823113 ~ 7826340 (+) True LOC118965232
TU650360 other upstream 514988 7487205 ~ 7487598 (+) True G570616
TU650345 other upstream 561838 7438559 ~ 7440748 (+) True G570601
TU650663 other downstream 10862 8013866 ~ 8015576 (+) False LOC110504762
TU650647 other downstream 32668 8035672 ~ 8053731 (+) True LOC110497026
TU650651 other downstream 60103 8063107 ~ 8071558 (+) False G570827
TU650653 other downstream 60103 8063107 ~ 8071558 (+) False G570827
TU650656 other downstream 60103 8063107 ~ 8071558 (+) False G570827

Expression Profile