RNA id: TU653732


Basic Information

Item Value
RNA id TU653732
length 234
lncRNA type inter_gene
GC content 0.32
exon number 2
gene id G573369
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 10134042 ~ 10154398 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cagttagttatttaggctatattcagttagttatgtaggctatattcagttagttatgtaggctatattcagttagttatgtggctatattcagtttgttatgtaggctatattcagttagttatgtaggctatatccagttagttatgtggctatattcagttagttatgtaggctatatccagttagttatgtaggctatatccagttagttatgtaggctatattcagtta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU653725 lncRNA upstream 7958 10125848 ~ 10126084 (+) True G573363
TU653287 lncRNA upstream 67860 10065569 ~ 10066182 (+) True G572986
TU653258 lncRNA upstream 111865 10020340 ~ 10022177 (+) True G572969
TU653257 lncRNA upstream 112477 10020340 ~ 10021565 (+) False G572969
TU653252 lncRNA upstream 121303 10011188 ~ 10012739 (+) True G572964
TU653745 lncRNA downstream 11654 10166052 ~ 10201258 (+) False G573380
TU653747 lncRNA downstream 11654 10166052 ~ 10167143 (+) False G573380
TU653748 lncRNA downstream 11654 10166052 ~ 10167143 (+) True G573380
TU653760 lncRNA downstream 33748 10188146 ~ 10191010 (+) False LOC110527289
TU653758 lncRNA downstream 35936 10190334 ~ 10197214 (+) False LOC110527289
XM_036982462.1 mRNA upstream 153612 9879599 ~ 9980430 (+) False LOC110497049
XM_036982459.1 mRNA upstream 257497 9783076 ~ 9876545 (+) False LOC118965239
XM_036982461.1 mRNA upstream 257497 9817331 ~ 9876545 (+) False LOC118965239
XM_036982460.1 mRNA upstream 257497 9817332 ~ 9876545 (+) False LOC118965239
XM_036982458.1 mRNA upstream 352413 9776039 ~ 9781629 (+) True LOC110528748
XM_036982490.1 mRNA downstream 19217 10173615 ~ 10233047 (+) False LOC110527289
XR_005052502.1 mRNA downstream 219520 10373918 ~ 10378145 (+) True LOC118965244
XM_036982498.1 mRNA downstream 226627 10381025 ~ 10410589 (+) False LOC110527198
XM_036982497.1 mRNA downstream 226630 10381028 ~ 10410589 (+) True LOC110527198
XM_021610859.2 mRNA downstream 266786 10421184 ~ 10423568 (+) True LOC110528725
TU653729 other upstream 2026 10128121 ~ 10132016 (+) True G573366
TU653149 other upstream 158914 9966667 ~ 9975128 (+) True LOC110497049
TU652659 other upstream 1200164 8930109 ~ 8933878 (+) False G572449
TU652657 other upstream 1200164 8931993 ~ 8933878 (+) False G572449
TU652658 other upstream 1200164 8931993 ~ 8933878 (+) True G572449
TU653759 other downstream 25021 10179419 ~ 10179835 (+) False LOC110527289
TU654524 other downstream 721709 10876107 ~ 10877184 (+) False G574038
TU654622 other downstream 849106 11003504 ~ 11076001 (+) True G574122
TU654699 other downstream 947147 11101545 ~ 11102286 (+) True G574194
TU654755 other downstream 1024398 11178796 ~ 11197247 (+) True G574244

Expression Profile