RNA id: TU655463



Basic Information


Item Value
RNA id TU655463
length 336
lncRNA type antisense_over
GC content 0.51
exon number 2
gene id G574853
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 11728621 ~ 11728988 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGTCATTGTTGACAGGATGGTCCTTGGAGAATCCACAGTGAAGTTGTAAAATATACGGCCTGGAGAGGAGGACGGGATAggtggagtgtgtgtgggtgggtcgGGGGGGttagtgtgtgtgtgtgtgtgtgtgtgtgtagggaatgGGGCTGGTCTGATGTGTACCAAGATCAGGGCCACAGTACTCCTCAGCAGGAAACACAATCACCCACAGGTCTCTTCACTGATCAGCAACAGGAAACACAACCACCCACAAGTGTCTTCACTGGTCAGCAACAGGAAACAGTCCACCTTACAGCCTACTGTTCAGGTAATCCAATCAGAGACACCCGCTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU655441 lncRNA upstream 30990 11695277 ~ 11697631 (+) True G574834
TU655408 lncRNA upstream 52145 11652019 ~ 11676476 (+) False G574812
TU655407 lncRNA upstream 52145 11673158 ~ 11676476 (+) False G574812
TU655409 lncRNA upstream 52145 11673158 ~ 11676476 (+) True G574812
TU655404 lncRNA upstream 80152 11648195 ~ 11648469 (+) True G574809
TU655699 lncRNA downstream 11566 11740554 ~ 11740815 (+) True G575015
TU655705 lncRNA downstream 17302 11746290 ~ 11746494 (+) True G575020
TU655706 lncRNA downstream 17629 11746617 ~ 11746927 (+) True G575021
TU655718 lncRNA downstream 27895 11756883 ~ 11763233 (+) True LOC110495473
TU655723 lncRNA downstream 36834 11765822 ~ 11766418 (+) True G575034
XM_021610962.2 mRNA upstream 100500 11536906 ~ 11628121 (+) False LOC110528830
XM_021610963.2 mRNA upstream 100500 11536906 ~ 11628121 (+) True LOC110528830
XM_036982552.1 mRNA upstream 229754 11496553 ~ 11498867 (+) False LOC118965246
XM_036982527.1 mRNA upstream 298513 11016278 ~ 11430108 (+) False LOC110495463
XM_021570748.2 mRNA downstream 14966 11743954 ~ 11750311 (+) False LOC110495474
XM_021570747.2 mRNA downstream 27743 11756731 ~ 11764384 (+) False LOC110495473
XM_036982556.1 mRNA downstream 45474 11774462 ~ 11776663 (+) True LOC118965247
XM_036984405.1 mRNA downstream 97514 11826502 ~ 11836170 (+) False LOC110497002
XM_036982557.1 mRNA downstream 132180 11861168 ~ 12118392 (+) False LOC110528828
TU655347 other upstream 230705 11496915 ~ 11497916 (+) True LOC118965246
TU655340 other upstream 240117 11485253 ~ 11488504 (+) False G574754
TU655341 other upstream 240117 11485253 ~ 11488504 (+) True G574754
TU654876 other upstream 378768 11349349 ~ 11349853 (+) True G574348
TU654811 other upstream 477841 11250099 ~ 11250780 (+) True G574284
TU655701 other downstream 15018 11744006 ~ 11745659 (+) False LOC110495474
TU655704 other downstream 19343 11748331 ~ 11750155 (+) True LOC110495474
TU655758 other downstream 100996 11829984 ~ 11835315 (+) True LOC110497002
TU656360 other downstream 735264 12464252 ~ 12468751 (+) True LOC110528829
TU656570 other downstream 813029 12542017 ~ 12542481 (+) True G575758

Expression Profile