RNA id: TU656031


Basic Information

Item Value
RNA id TU656031
length 200
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G575275
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12205331 ~ 12205530 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ACTATCCGCATTATAGGCTATGCAGCCTATTTGTAATAGTACTATTGTTGGAAATGTGCAAAAAATACACTGTACAATAGGGAAAGGCAAGAAGAGAATGTTCTATGTGGTAGTATCATGCAGCTCAATGGAGGAAAACGAGGCAGCATTCCCTTGGCTGGGCCTGAGACTGAGAGAGGCAATATTCCATACTGTAGCAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU656021 lncRNA upstream 14084 12187908 ~ 12191247 (+) True G575265
TU655984 lncRNA upstream 85546 12118873 ~ 12119785 (+) True G575232
TU655862 lncRNA upstream 132557 11997304 ~ 12072774 (+) True G575134
TU655928 lncRNA upstream 214864 11990143 ~ 11990467 (+) True G575184
TU655910 lncRNA upstream 237522 11957347 ~ 11967809 (+) True G575166
TU656032 lncRNA downstream 63 12205593 ~ 12205805 (+) True G575276
TU656024 lncRNA downstream 7202 12212732 ~ 12212997 (+) True G575268
TU656022 lncRNA downstream 50287 12255817 ~ 12256096 (+) True LOC110528831
TU656265 lncRNA downstream 51962 12257492 ~ 12257945 (+) True G575489
TU656319 lncRNA downstream 100506 12306036 ~ 12311314 (+) True G575533
XM_021611004.2 mRNA upstream 17958 12179637 ~ 12187373 (+) True LOC110528845
XM_036982560.1 mRNA upstream 86939 11861169 ~ 12118392 (+) False LOC110528828
XR_005052504.1 mRNA downstream 7608 12213138 ~ 12245387 (+) False LOC110528831
XM_036982563.1 mRNA downstream 7609 12213139 ~ 12256113 (+) False LOC110528831
XM_036982564.1 mRNA downstream 7609 12213139 ~ 12256113 (+) False LOC110528831
XM_021610974.2 mRNA downstream 54414 12259944 ~ 12275532 (+) True LOC110528835
XM_036982573.1 mRNA downstream 82058 12287588 ~ 12350020 (+) False LOC110528723
TU655758 other upstream 370016 11829984 ~ 11835315 (+) True LOC110497002
TU655704 other upstream 455176 11748331 ~ 11750155 (+) True LOC110495474
TU655701 other upstream 459672 11744006 ~ 11745659 (+) False LOC110495474
TU655347 other upstream 707415 11496915 ~ 11497916 (+) True LOC118965246
TU655341 other upstream 716827 11485253 ~ 11488504 (+) True G574754
TU656360 other downstream 258722 12464252 ~ 12468751 (+) True LOC110528829
TU656570 other downstream 336487 12542017 ~ 12542481 (+) True G575758
TU657066 other downstream 967254 13172784 ~ 13173074 (+) True G576160
TU657068 other downstream 967782 13173312 ~ 13207489 (+) True G576161
TU657184 other downstream 1280986 13486516 ~ 13489737 (+) True G576241

Expression Profile