Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU660558 |
| length | 553 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G579000 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 16464240 ~ 16464792 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU660551 | lncRNA | upstream | 6290 | 16457220 ~ 16457950 (+) | False | LOC110528786 |
| TU660531 | lncRNA | upstream | 65142 | 16398697 ~ 16399098 (+) | True | G578977 |
| TU660501 | lncRNA | upstream | 107435 | 16344475 ~ 16356805 (+) | False | LOC110528903 |
| TU660559 | lncRNA | downstream | 160 | 16464952 ~ 16465550 (+) | True | G579001 |
| TU660578 | lncRNA | downstream | 44801 | 16509593 ~ 16509824 (+) | True | G579020 |
| TU660985 | lncRNA | downstream | 77049 | 16541841 ~ 16542062 (+) | True | G579319 |
| TU660986 | lncRNA | downstream | 78211 | 16543003 ~ 16543433 (+) | True | G579320 |
| TU660989 | lncRNA | downstream | 79753 | 16544545 ~ 16544787 (+) | True | G579323 |
| XM_036982785.1 | mRNA | upstream | 541 | 16457712 ~ 16463699 (+) | False | LOC110528786 |
| XM_021611065.2 | mRNA | upstream | 12190 | 16446388 ~ 16452050 (+) | False | LOC110528885 |
| XM_021611064.2 | mRNA | upstream | 12190 | 16446887 ~ 16452050 (+) | True | LOC110528885 |
| XM_021611046.2 | mRNA | upstream | 28526 | 16431284 ~ 16435714 (+) | False | d2hgdh |
| XM_036982786.1 | mRNA | downstream | 45645 | 16510437 ~ 16537956 (+) | False | LOC110528787 |
| XM_036982787.1 | mRNA | downstream | 66681 | 16531473 ~ 16537956 (+) | True | LOC110528787 |
| XM_021611015.2 | mRNA | downstream | 81523 | 16546315 ~ 16559294 (+) | False | LOC110528859 |
| XM_021611016.2 | mRNA | downstream | 81523 | 16546315 ~ 16559294 (+) | False | LOC110528859 |
| XM_021611057.2 | mRNA | downstream | 190294 | 16655086 ~ 16663049 (+) | True | LOC110528883 |
| TU660554 | other | upstream | 548 | 16462427 ~ 16463692 (+) | True | LOC110528786 |
| TU660552 | other | upstream | 3347 | 16458045 ~ 16460893 (+) | False | LOC110528786 |
| TU660553 | other | upstream | 3566 | 16458045 ~ 16460674 (+) | False | LOC110528786 |
| TU660317 | other | upstream | 416233 | 16046283 ~ 16048007 (+) | True | LOC110528915 |
| TU660251 | other | upstream | 459247 | 15993658 ~ 16004993 (+) | True | LOC110528906 |
| TU661299 | other | downstream | 353750 | 16818542 ~ 16819890 (+) | True | G579566 |
| TU661421 | other | downstream | 577617 | 17042409 ~ 17097924 (+) | False | LOC110527403 |
| TU661419 | other | downstream | 629803 | 17094595 ~ 17097924 (+) | False | LOC110527403 |
| TU661420 | other | downstream | 629803 | 17094595 ~ 17097540 (+) | True | LOC110527403 |
| TU661990 | other | downstream | 868932 | 17333724 ~ 17334129 (+) | True | si:ch211-181l5.2 |
