Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU662435 |
| length | 247 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G580537 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 17535429 ~ 17535675 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU662434 | lncRNA | downstream | 11 | 17535198 ~ 17535418 (-) | True | G580536 |
| TU662426 | lncRNA | downstream | 8615 | 17526589 ~ 17526814 (-) | True | G580528 |
| TU662425 | lncRNA | downstream | 8901 | 17526265 ~ 17526528 (-) | True | G580527 |
| TU662424 | lncRNA | downstream | 11172 | 17524027 ~ 17524257 (-) | True | G580526 |
| TU662368 | lncRNA | downstream | 16954 | 17514375 ~ 17518475 (-) | True | G580475 |
| TU662436 | lncRNA | upstream | 583 | 17536258 ~ 17536798 (-) | True | LOC110527416 |
| TU662437 | lncRNA | upstream | 9817 | 17545492 ~ 17545696 (-) | True | G580539 |
| TU662438 | lncRNA | upstream | 11019 | 17546694 ~ 17546937 (-) | True | G580540 |
| TU662443 | lncRNA | upstream | 30416 | 17566091 ~ 17566509 (-) | True | G580545 |
| TU662447 | lncRNA | upstream | 34454 | 17570129 ~ 17570373 (-) | True | G580549 |
| XM_021608678.2 | mRNA | downstream | 53461 | 17474265 ~ 17481968 (-) | True | LOC110527417 |
| XM_021608679.2 | mRNA | downstream | 58766 | 17474265 ~ 17476663 (-) | False | LOC110527417 |
| XM_036982837.1 | mRNA | downstream | 73217 | 17434219 ~ 17462212 (-) | True | LOC110527413 |
| XM_021608665.2 | mRNA | downstream | 73219 | 17431894 ~ 17462210 (-) | False | LOC110527413 |
| XM_021608675.2 | mRNA | upstream | 643 | 17536318 ~ 17662496 (-) | False | LOC110527416 |
| XM_021608676.2 | mRNA | upstream | 643 | 17536318 ~ 17662496 (-) | False | LOC110527416 |
| XM_021608677.2 | mRNA | upstream | 643 | 17536318 ~ 17662496 (-) | False | LOC110527416 |
| XR_005052540.1 | mRNA | upstream | 7201 | 17542876 ~ 17662496 (-) | False | LOC110527416 |
| XR_005052541.1 | mRNA | upstream | 7202 | 17542877 ~ 17662496 (-) | False | LOC110527416 |
| TU662381 | other | downstream | 134893 | 17397857 ~ 17400536 (-) | True | G580487 |
| TU661518 | other | downstream | 734743 | 16797782 ~ 16800686 (-) | True | LOC110527396 |
| TU661517 | other | downstream | 734807 | 16797680 ~ 16800622 (-) | False | LOC110527396 |
| TU661516 | other | downstream | 734807 | 16797782 ~ 16800622 (-) | False | LOC110527396 |
| TU661132 | other | downstream | 974284 | 16559963 ~ 16561145 (-) | False | LOC110528867 |
| TU663064 | other | upstream | 507252 | 18042927 ~ 18043380 (-) | True | G581089 |
| TU663175 | other | upstream | 681483 | 18217158 ~ 18235038 (-) | True | G581174 |
| TU665792 | other | upstream | 2679974 | 20215649 ~ 20249985 (-) | True | G583661 |
| TU666686 | other | upstream | 3237192 | 20772867 ~ 20778065 (-) | True | otos2 |
| TU666669 | other | upstream | 3302813 | 20838488 ~ 20839336 (-) | False | LOC110527470 |
