Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU662571 |
| length | 287 |
| lncRNA type | intronic |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G580657 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 17773785 ~ 17774331 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU662555 | lncRNA | downstream | 23690 | 17747688 ~ 17750095 (-) | False | G580648 |
| TU662560 | lncRNA | downstream | 23690 | 17747753 ~ 17750095 (-) | True | G580648 |
| TU662521 | lncRNA | downstream | 124870 | 17648579 ~ 17648915 (-) | True | G580621 |
| TU662519 | lncRNA | downstream | 127059 | 17646519 ~ 17646726 (-) | True | G580619 |
| TU662518 | lncRNA | downstream | 127604 | 17645972 ~ 17646181 (-) | True | G580618 |
| TU662589 | lncRNA | upstream | 43779 | 17818110 ~ 17822171 (-) | True | G580674 |
| TU662645 | lncRNA | upstream | 139012 | 17913343 ~ 17913585 (-) | True | G580729 |
| TU662653 | lncRNA | upstream | 151418 | 17925749 ~ 17927237 (-) | True | G580737 |
| TU662654 | lncRNA | upstream | 153047 | 17927378 ~ 17929273 (-) | True | G580738 |
| TU662657 | lncRNA | upstream | 157723 | 17932054 ~ 17932260 (-) | True | G580741 |
| XM_036982838.1 | mRNA | downstream | 58851 | 17665513 ~ 17714934 (-) | True | LOC110528801 |
| XM_036982839.1 | mRNA | downstream | 59862 | 17665513 ~ 17713923 (-) | False | LOC110528801 |
| XM_036982840.1 | mRNA | downstream | 59863 | 17665513 ~ 17713922 (-) | False | LOC110528801 |
| XM_036982841.1 | mRNA | downstream | 84469 | 17665513 ~ 17689316 (-) | False | LOC110528801 |
| XR_005052541.1 | mRNA | downstream | 111289 | 17542877 ~ 17662496 (-) | False | LOC110527416 |
| XM_021608262.2 | mRNA | upstream | 49195 | 17823526 ~ 17827349 (-) | True | LOC110527099 |
| XR_002474132.2 | mRNA | upstream | 160463 | 17934794 ~ 17940045 (-) | True | LOC110527421 |
| XM_036982850.1 | mRNA | upstream | 305660 | 18079991 ~ 18090210 (-) | False | LOC110527423 |
| XM_036982849.1 | mRNA | upstream | 305660 | 18079991 ~ 18090254 (-) | False | LOC110527423 |
| XM_021608685.2 | mRNA | upstream | 305660 | 18079991 ~ 18090271 (-) | True | LOC110527423 |
| TU662381 | other | downstream | 373249 | 17397857 ~ 17400536 (-) | True | G580487 |
| TU661518 | other | downstream | 973099 | 16797782 ~ 16800686 (-) | True | LOC110527396 |
| TU661517 | other | downstream | 973163 | 16797680 ~ 16800622 (-) | False | LOC110527396 |
| TU661516 | other | downstream | 973163 | 16797782 ~ 16800622 (-) | False | LOC110527396 |
| TU661132 | other | downstream | 1212640 | 16559963 ~ 16561145 (-) | False | LOC110528867 |
| TU663064 | other | upstream | 268596 | 18042927 ~ 18043380 (-) | True | G581089 |
| TU663175 | other | upstream | 442827 | 18217158 ~ 18235038 (-) | True | G581174 |
| TU665792 | other | upstream | 2441318 | 20215649 ~ 20249985 (-) | True | G583661 |
| TU666686 | other | upstream | 2998536 | 20772867 ~ 20778065 (-) | True | otos2 |
| TU666669 | other | upstream | 3064157 | 20838488 ~ 20839336 (-) | False | LOC110527470 |
