RNA id: TU674306



Basic Information


Item Value
RNA id TU674306
length 325
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G591403
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 26682281 ~ 26682605 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


actttcagtgctgcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaaatttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagtgataatattgaaatggaaggagtatcagacc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU674247 lncRNA downstream 84184 26597833 ~ 26598097 (-) True G591349
TU674246 lncRNA downstream 85005 26597014 ~ 26597276 (-) True G591348
TU674229 lncRNA downstream 105991 26575613 ~ 26576290 (-) False LOC110527590
TU674184 lncRNA downstream 118970 26562791 ~ 26563311 (-) True G591291
TU674221 lncRNA downstream 138025 26543995 ~ 26544256 (-) True G591323
TU674316 lncRNA upstream 18086 26700691 ~ 26700913 (-) True G591413
TU674317 lncRNA upstream 20909 26703514 ~ 26703748 (-) True G591414
TU674347 lncRNA upstream 83266 26765871 ~ 26770809 (-) True G591443
TU674492 lncRNA upstream 285572 26968177 ~ 27007229 (-) True G591583
TU674631 lncRNA upstream 464632 27147237 ~ 27147476 (-) True G591715
XM_021608973.2 mRNA downstream 96756 26575972 ~ 26585525 (-) False LOC110527590
XM_036983096.1 mRNA downstream 96766 26575972 ~ 26585515 (-) False LOC110527590
XM_036983095.1 mRNA downstream 101488 26575972 ~ 26580793 (-) False LOC110527590
XM_021608972.2 mRNA downstream 111202 26547669 ~ 26571079 (-) True gart
XM_036983092.1 mRNA downstream 542332 26096153 ~ 26139949 (-) True LOC110527587
XM_036983097.1 mRNA upstream 47033 26729638 ~ 26865769 (-) False LOC110527591
XM_036983099.1 mRNA upstream 47033 26729638 ~ 26865769 (-) False LOC110527591
XM_036983100.1 mRNA upstream 47033 26729638 ~ 26865769 (-) False LOC110527591
XM_036983098.1 mRNA upstream 47033 26729638 ~ 27142641 (-) True LOC110527591
XM_021608979.2 mRNA upstream 939101 27621706 ~ 27691752 (-) True fam155a
TU674230 other downstream 96774 26578169 ~ 26585507 (-) True LOC110527590
TU673308 other downstream 523976 26157993 ~ 26158305 (-) True G590443
TU672491 other downstream 1136863 25544735 ~ 25545418 (-) True G589705
TU672303 other downstream 1391676 25248680 ~ 25290605 (-) True LOC110527565
TU672308 other downstream 1403407 25201406 ~ 25278874 (-) True G589529
TU674725 other upstream 483570 27166175 ~ 27166468 (-) True G591808
TU675224 other upstream 800352 27482957 ~ 27483780 (-) True G592298
TU677787 other upstream 2341802 29024407 ~ 29026049 (-) True G594636
TU677925 other upstream 2734250 29416855 ~ 29495130 (-) False G594762
TU678069 other upstream 2885596 29568201 ~ 29593462 (-) True G594900

Expression Profile