RNA id: TU674725


Basic Information

Item Value
RNA id TU674725
length 294
RNA type TUCP
GC content 0.45
exon number 1
gene id G591808
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27166175 ~ 27166468 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cttcgatcacgtggactgggatatgttccgcattgcgtcaaacaacaacattgatgaatacgctgattcggtgagcgagtttattagcaagtgcatcggcgatgtcgtaccaacagcaactattaaaacattccaaaACCAGAAACTGGGGATTGCTGGCAGCATTCGCGTAAAaatgaaagcgcgaaccactgcttttaatcagggcaaggtgaccggaaacatgaccgaatacaaacagtgtagctattccctccgcaaggcaatcaaaaaagctaagcatcagtattgaga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU674631 lncRNA downstream 18699 27147237 ~ 27147476 (-) True G591715
TU674492 lncRNA downstream 158946 26968177 ~ 27007229 (-) True G591583
TU674347 lncRNA downstream 395366 26765871 ~ 26770809 (-) True G591443
TU674317 lncRNA downstream 462427 26703514 ~ 26703748 (-) True G591414
TU674316 lncRNA downstream 465262 26700691 ~ 26700913 (-) True G591413
TU674802 lncRNA upstream 97651 27264119 ~ 27264360 (-) True G591882
TU674937 lncRNA upstream 185680 27352148 ~ 27352368 (-) True G592016
TU674996 lncRNA upstream 222754 27389222 ~ 27389538 (-) True G592075
TU675022 lncRNA upstream 246483 27412951 ~ 27417830 (-) True G592101
TU675206 lncRNA upstream 280207 27446675 ~ 27447332 (-) True G592282
XM_036983098.1 mRNA downstream 23534 26729638 ~ 27142641 (-) True LOC110527591
XM_036983097.1 mRNA downstream 300406 26729638 ~ 26865769 (-) False LOC110527591
XM_036983099.1 mRNA downstream 300406 26729638 ~ 26865769 (-) False LOC110527591
XM_036983100.1 mRNA downstream 300406 26729638 ~ 26865769 (-) False LOC110527591
XM_021608973.2 mRNA downstream 580650 26575972 ~ 26585525 (-) False LOC110527590
XM_021608979.2 mRNA upstream 455238 27621706 ~ 27691752 (-) True fam155a
XM_021608980.2 mRNA upstream 536985 27703453 ~ 27707840 (-) True LOC110527595
XM_036983101.1 mRNA upstream 577495 27743963 ~ 27765935 (-) False irs2a
XM_021608983.2 mRNA upstream 615469 27781937 ~ 27785215 (-) True LOC110527597
XM_021608981.2 mRNA upstream 619475 27785943 ~ 27795723 (-) False LOC110527596
TU674230 other downstream 580668 26578169 ~ 26585507 (-) True LOC110527590
TU673308 other downstream 1007870 26157993 ~ 26158305 (-) True G590443
TU672491 other downstream 1620757 25544735 ~ 25545418 (-) True G589705
TU672303 other downstream 1875570 25248680 ~ 25290605 (-) True LOC110527565
TU672308 other downstream 1887301 25201406 ~ 25278874 (-) True G589529
TU675224 other upstream 316489 27482957 ~ 27483780 (-) True G592298
TU677787 other upstream 1857939 29024407 ~ 29026049 (-) True G594636
TU677925 other upstream 2250387 29416855 ~ 29495130 (-) False G594762
TU678069 other upstream 2401733 29568201 ~ 29593462 (-) True G594900
TU678077 other upstream 2423525 29589993 ~ 29625899 (-) False G594905

Expression Profile