RNA id: TU675293


Basic Information

Item Value
RNA id TU675293
length 264
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G592366
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27595581 ~ 27598399 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gaagaaccacactaaacacaaacactaccaaaacaataaacttaacgaaaaccgaaacagcctatacttgtgtaacctaacaaagaacaatgacactaaggacaatcacccacgacaaactcaaagaatatggctgcctaaatatggttcccaatcagagacaacgataaacacctgcctctgattgagaaccacttcagacagccatagacttagctagaacaccccactagctacaatccccatacatacacaccacataca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU675285 lncRNA downstream 9807 27585553 ~ 27585774 (-) True G592359
TU675279 lncRNA downstream 16413 27578888 ~ 27579168 (-) True G592353
TU675267 lncRNA downstream 35346 27559961 ~ 27560235 (-) True G592341
TU675226 lncRNA downstream 105099 27490254 ~ 27490482 (-) True G592300
TU675225 lncRNA downstream 109445 27484529 ~ 27486136 (-) True G592299
TU675305 lncRNA upstream 10938 27609337 ~ 27609719 (-) True G592378
TU675325 lncRNA upstream 50384 27648783 ~ 27648986 (-) True G592398
TU675326 lncRNA upstream 50619 27649018 ~ 27649491 (-) True G592399
TU675327 lncRNA upstream 51239 27649638 ~ 27649848 (-) True G592400
TU675329 lncRNA upstream 53083 27651482 ~ 27651901 (-) True G592402
XM_036983098.1 mRNA downstream 452940 26729638 ~ 27142641 (-) True LOC110527591
XM_036983097.1 mRNA downstream 729812 26729638 ~ 26865769 (-) False LOC110527591
XM_036983099.1 mRNA downstream 729812 26729638 ~ 26865769 (-) False LOC110527591
XM_036983100.1 mRNA downstream 729812 26729638 ~ 26865769 (-) False LOC110527591
XM_021608973.2 mRNA downstream 1010056 26575972 ~ 26585525 (-) False LOC110527590
XM_021608979.2 mRNA upstream 23307 27621706 ~ 27691752 (-) True fam155a
XM_021608980.2 mRNA upstream 105054 27703453 ~ 27707840 (-) True LOC110527595
XM_036983101.1 mRNA upstream 145564 27743963 ~ 27765935 (-) False irs2a
XM_021608983.2 mRNA upstream 183538 27781937 ~ 27785215 (-) True LOC110527597
XM_021608981.2 mRNA upstream 187544 27785943 ~ 27795723 (-) False LOC110527596
TU675224 other downstream 111801 27482957 ~ 27483780 (-) True G592298
TU674725 other downstream 429113 27166175 ~ 27166468 (-) True G591808
TU674230 other downstream 1010074 26578169 ~ 26585507 (-) True LOC110527590
TU673308 other downstream 1437276 26157993 ~ 26158305 (-) True G590443
TU672491 other downstream 2050163 25544735 ~ 25545418 (-) True G589705
TU677787 other upstream 1426008 29024407 ~ 29026049 (-) True G594636
TU677925 other upstream 1818456 29416855 ~ 29495130 (-) False G594762
TU678069 other upstream 1969802 29568201 ~ 29593462 (-) True G594900
TU678077 other upstream 1991594 29589993 ~ 29625899 (-) False G594905
TU678078 other upstream 1997617 29596016 ~ 29599570 (-) True G594905

Expression Profile