RNA id: TU681751



Basic Information


Item Value
RNA id TU681751
length 218
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G598411
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 32454489 ~ 32454706 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CACAAAtagtgattaaataaataacttacctttgatgatcttcctctgtttgcaatcccaagggtcccagctacacaatgaatggttgttttgtttgataaagtccatctttatatccaaaaaagtctgtttagttggcgccaatgatctcagtaatccactcgttcaacatgcatccAAACGAATCCAAAAAGTAACCGGTAAagtttgtccaaaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU681749 lncRNA downstream 2298 32451899 ~ 32452191 (-) True G598409
TU681738 lncRNA downstream 15664 32438619 ~ 32438825 (-) True G598398
TU681731 lncRNA downstream 20542 32433605 ~ 32433947 (-) True G598394
TU681690 lncRNA downstream 33417 32420321 ~ 32421072 (-) False G598355
TU681691 lncRNA downstream 33635 32420321 ~ 32420854 (-) True G598355
TU681758 lncRNA upstream 8433 32463139 ~ 32463377 (-) True G598418
TU681759 lncRNA upstream 8696 32463402 ~ 32463644 (-) True G598419
TU681763 lncRNA upstream 11914 32466620 ~ 32466935 (-) True G598423
TU681718 lncRNA upstream 14674 32469380 ~ 32480790 (-) True G598382
TU681770 lncRNA upstream 44723 32499429 ~ 32500269 (-) True G598430
XM_021609077.2 mRNA downstream 29839 32421664 ~ 32424650 (-) True si:ch211-15p9.2
XM_021609072.2 mRNA downstream 131331 32305811 ~ 32323158 (-) True psmf1
XM_021609071.2 mRNA downstream 161238 32288164 ~ 32293251 (-) True LOC110527655
XM_036981859.1 mRNA downstream 187844 32261170 ~ 32266645 (-) False bc10
XR_005052736.1 mRNA upstream 89252 32543958 ~ 32544012 (-) True LOC118965410
XM_021609090.2 mRNA upstream 337474 32792180 ~ 32798898 (-) False LOC110527664
XM_021609091.2 mRNA upstream 337474 32792180 ~ 32799074 (-) False LOC110527664
XM_021609093.2 mRNA upstream 337474 32792180 ~ 32799450 (-) False LOC110527664
XM_021609092.2 mRNA upstream 337474 32792180 ~ 32816687 (-) False LOC110527664
TU681689 other downstream 34341 32418190 ~ 32420148 (-) True G598354
TU679696 other downstream 1375171 31078512 ~ 31079318 (-) True G596433
TU679613 other downstream 1517875 30936165 ~ 30936614 (-) True G596352
TU679294 other downstream 1591169 30862857 ~ 30863320 (-) True G596039
TU679349 other downstream 1609865 30844181 ~ 30844624 (-) True G596094
TU682450 other upstream 783341 33238047 ~ 33238435 (-) False G599058
TU682449 other upstream 783441 33238147 ~ 33239795 (-) True G599058
TU683215 other upstream 1221373 33676079 ~ 33677297 (-) False G599788
TU683219 other upstream 1221464 33676170 ~ 33677297 (-) False G599788
TU683321 other upstream 1315344 33770050 ~ 33774614 (-) True LOC110527679

Expression Profile