RNA id: TU684338



Basic Information


Item Value
RNA id TU684338
length 346
RNA type TUCP
GC content 0.51
exon number 2
gene id G600721
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 34614492 ~ 34614875 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCCTTCATAAATCCATGCTGTGAGTACTGCCATGTCCAGATGGAGAAATGTCCCTTCATAAATCCCTGCTGTGTGTACTGCCATGTCCAGATGGAGAGAATCCCTGATGTGTGTACTGCCACGTCCAGATGGAGAGAATCCCTGCTGTGTGTACTGCCATGTCCAGATGGAGAGAATCCCTGCTATGTGTACTGCCATGTCCAGATGGAGAGAATCCCTGCTGTGTGTACTGCCATGTCCAGATGGAGAGAATCCCTGCTGTGTGTACTGCCATGTCCAGATGGAGAGAATCCCTGCTGTGTGTACTGTCATGTCCAGATGGAGAGAATCCCTGCTGTGTGTACTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU684334 lncRNA downstream 1478 34604291 ~ 34613014 (-) True G600719
TU684333 lncRNA downstream 8116 34604291 ~ 34606376 (-) False G600719
TU684318 lncRNA downstream 52615 34561581 ~ 34561877 (-) True G600708
TU684317 lncRNA downstream 52945 34561333 ~ 34561547 (-) True G600707
TU684315 lncRNA downstream 53860 34560304 ~ 34560632 (-) True G600705
TU684342 lncRNA upstream 16198 34631073 ~ 34687379 (-) True G600724
TU684366 lncRNA upstream 49940 34664815 ~ 34668369 (-) True G600747
TU684370 lncRNA upstream 59680 34674555 ~ 34674979 (-) True G600750
TU684401 lncRNA upstream 105430 34720305 ~ 34720561 (-) True G600777
TU684403 lncRNA upstream 116723 34731598 ~ 34734008 (-) False G600779
XM_021609121.2 mRNA downstream 656167 33951975 ~ 33958325 (-) False abraa
NM_001124468.1 mRNA downstream 778634 33817223 ~ 33835858 (-) True ywhaba
XM_021609117.2 mRNA downstream 839584 33770071 ~ 33774908 (-) False LOC110527679
XM_036983160.1 mRNA downstream 867792 33682172 ~ 33746700 (-) True LOC110527676
XM_021609112.2 mRNA downstream 867793 33677345 ~ 33746699 (-) False LOC110527676
XM_036984425.1 mRNA upstream 484532 35099407 ~ 35200098 (-) True LOC118965352
XM_036984426.1 mRNA upstream 997514 35612389 ~ 35612805 (-) True LOC118965353
XM_036983171.1 mRNA upstream 1923263 36538138 ~ 36559210 (-) False LOC110527685
XM_036983172.1 mRNA upstream 1923263 36538138 ~ 36559210 (-) False LOC110527685
XM_036983175.1 mRNA upstream 1923263 36538138 ~ 36559210 (-) False LOC110527685
TU683321 other downstream 839878 33770050 ~ 33774614 (-) True LOC110527679
TU683215 other downstream 937195 33676079 ~ 33677297 (-) False G599788
TU683219 other downstream 937195 33676170 ~ 33677297 (-) False G599788
TU682449 other downstream 1374697 33238147 ~ 33239795 (-) True G599058
TU682450 other downstream 1376057 33238047 ~ 33238435 (-) False G599058
TU684513 other upstream 350572 34965447 ~ 34966786 (-) True G600872
TU684544 other upstream 387005 35001880 ~ 35055228 (-) False G600881
TU684542 other upstream 387605 35002480 ~ 35055133 (-) False G600881
TU684989 other upstream 1145824 35760699 ~ 35761270 (-) True G601245
TU688481 other upstream 3974280 38589155 ~ 38597519 (-) False G604485

Expression Profile