RNA id: TU684989


Basic Information

Item Value
RNA id TU684989
length 572
RNA type TUCP
GC content 0.48
exon number 1
gene id G601245
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 35760699 ~ 35761270 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

actacctctattaCAACCTCCCCATGtctccactacctctaccactacctctattaCAACCTCCCCATGTCTCCACTACCTCTATTACAACCTCCCCATGTCtacactacctctaccactacctctattaCAACCTCCCCATgtctccactacatcctcatactacctctaccaccaccctccactacatcctcatactacctctattaCAACCTCACCATGTCTCCACTACCTCTATTACAACCTCCCCATGTCTCCACTACCTCTATTACAACCTCCCCATGTCTCCACTACCTCTATTACAACCTCCCCATGTCTCCACTACATCCTCAGactacctctatcactaccaccctccactacatcctcatactacctctatcactaccaccctccactacatcctcatactacctctatcactaccaccctccactacatcctcatactacctctatcactaccaccctccactacatcctcatactacctctatcactaccaccctccactacatcctcatactacctctatcactaccaccctccactacatcctcatactacctctac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU684958 lncRNA downstream 54435 35705908 ~ 35706264 (-) True G601220
TU684957 lncRNA downstream 54980 35705453 ~ 35705719 (-) True G601219
TU684956 lncRNA downstream 55516 35704782 ~ 35705183 (-) True G601218
TU684923 lncRNA downstream 134628 35625806 ~ 35626071 (-) True G601188
TU684910 lncRNA downstream 143038 35617374 ~ 35617661 (-) True G601183
TU684991 lncRNA upstream 4795 35766065 ~ 35766360 (-) True G601247
TU684994 lncRNA upstream 9559 35770829 ~ 35771201 (-) True G601250
TU684995 lncRNA upstream 11967 35773237 ~ 35773443 (-) True G601251
TU685004 lncRNA upstream 37189 35798459 ~ 35798915 (-) True G601260
TU685005 lncRNA upstream 45384 35806654 ~ 35807092 (-) True G601261
XM_036984426.1 mRNA downstream 147894 35612389 ~ 35612805 (-) True LOC118965353
XM_036984425.1 mRNA downstream 560601 35099407 ~ 35200098 (-) True LOC118965352
XM_021609121.2 mRNA downstream 1802374 33951975 ~ 33958325 (-) False abraa
NM_001124468.1 mRNA downstream 1924841 33817223 ~ 33835858 (-) True ywhaba
XM_021609117.2 mRNA downstream 1985791 33770071 ~ 33774908 (-) False LOC110527679
XM_036983171.1 mRNA upstream 776868 36538138 ~ 36559210 (-) False LOC110527685
XM_036983172.1 mRNA upstream 776868 36538138 ~ 36559210 (-) False LOC110527685
XM_036983175.1 mRNA upstream 776868 36538138 ~ 36559210 (-) False LOC110527685
XM_036983174.1 mRNA upstream 776868 36538138 ~ 36559211 (-) False LOC110527685
XM_021609122.2 mRNA upstream 781120 36542390 ~ 36559070 (-) False LOC110527685
TU684544 other downstream 705471 35001880 ~ 35055228 (-) False G600881
TU684542 other downstream 705566 35002480 ~ 35055133 (-) False G600881
TU684513 other downstream 793913 34965447 ~ 34966786 (-) True G600872
TU684338 other downstream 1145824 34614492 ~ 34614875 (-) True G600721
TU683321 other downstream 1986085 33770050 ~ 33774614 (-) True LOC110527679
TU688481 other upstream 2827885 38589155 ~ 38597519 (-) False G604485
TU688470 other upstream 2828147 38589417 ~ 38594816 (-) False G604484
TU688480 other upstream 2829598 38590868 ~ 38597519 (-) True G604485
TU688474 other upstream 2841060 38602330 ~ 38639400 (-) True G604484
TU689636 other upstream 3301735 39063005 ~ 39068828 (-) True LOC110527723

Expression Profile