Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU690521 |
| length | 241 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G606411 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 40108369 ~ 40108609 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU690519 | lncRNA | upstream | 501 | 40107638 ~ 40107868 (+) | True | G606409 |
| TU690515 | lncRNA | upstream | 6066 | 40102056 ~ 40102303 (+) | True | G606405 |
| TU690359 | lncRNA | upstream | 81412 | 39992825 ~ 40026957 (+) | True | LOC110527739 |
| TU689306 | lncRNA | upstream | 522042 | 39580045 ~ 39586327 (+) | True | G605248 |
| TU689217 | lncRNA | upstream | 640590 | 39467577 ~ 39467779 (+) | True | G605164 |
| TU690525 | lncRNA | downstream | 6979 | 40115588 ~ 40120632 (+) | False | G606412 |
| TU690528 | lncRNA | downstream | 6979 | 40115588 ~ 40125497 (+) | False | G606412 |
| TU690530 | lncRNA | downstream | 6979 | 40115588 ~ 40125497 (+) | True | G606412 |
| TU690510 | lncRNA | downstream | 18851 | 40127460 ~ 40141972 (+) | True | G606400 |
| TU690532 | lncRNA | downstream | 27153 | 40135762 ~ 40140407 (+) | True | G606414 |
| XM_021609216.2 | mRNA | upstream | 80911 | 39992766 ~ 40027458 (+) | False | LOC110527739 |
| XM_021609206.2 | mRNA | upstream | 334645 | 39433189 ~ 39773724 (+) | False | LOC110527736 |
| XM_021609203.2 | mRNA | upstream | 731513 | 39370730 ~ 39376856 (+) | True | LOC110527735 |
| XM_021609194.2 | mRNA | upstream | 798135 | 39291656 ~ 39310234 (+) | False | LOC110527730 |
| XM_021609219.2 | mRNA | downstream | 174944 | 40283553 ~ 40287403 (+) | True | csrp1b |
| XM_021608251.2 | mRNA | downstream | 183431 | 40292040 ~ 40296179 (+) | False | tnni1b |
| XM_021608252.2 | mRNA | downstream | 183433 | 40292042 ~ 40296179 (+) | False | tnni1b |
| XM_021608253.2 | mRNA | downstream | 183455 | 40292064 ~ 40296179 (+) | False | tnni1b |
| NM_001185028.1 | mRNA | downstream | 184819 | 40293428 ~ 40295414 (+) | True | tnni1b |
| TU688229 | other | upstream | 1517075 | 38584474 ~ 38591294 (+) | False | G604258 |
| TU688169 | other | upstream | 1608707 | 38499031 ~ 38499662 (+) | True | G604207 |
| TU686155 | other | upstream | 3017613 | 37089624 ~ 37090756 (+) | True | G602295 |
| TU685500 | other | upstream | 3532297 | 36573887 ~ 36576072 (+) | True | LOC110527686 |
| TU684077 | other | upstream | 5136964 | 34971128 ~ 34971405 (+) | True | G600531 |
| TU690507 | other | downstream | 17925 | 40126534 ~ 40134450 (+) | False | G606400 |
| TU690574 | other | downstream | 97960 | 40206569 ~ 40206897 (+) | True | G606452 |
| TU690586 | other | downstream | 114566 | 40223175 ~ 40224171 (+) | True | G606464 |
| TU690594 | other | downstream | 122276 | 40230885 ~ 40231225 (+) | True | G606469 |
| TU690810 | other | downstream | 330491 | 40439100 ~ 40440632 (+) | True | LOC110527751 |
