RNA id: TU691059


Basic Information

Item Value
RNA id TU691059
length 252
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G606853
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40467798 ~ 40468049 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cacgtggcaagcggtaccagagcgccaagtcgaggtccaaaaggcagcctctacccccaagccataagattcctgaacaggtcatcaaatggctacccagacccctcttacgctgctgctactctctgtttataatctatgcatagtcactttaactctacctacatgtacatatttcctcaattaccttaactaactggtgcccccgcacattgactctgtaccggtaccccctgtatatagcctcgctag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU691050 lncRNA downstream 10105 40457032 ~ 40457693 (-) True G606845
TU691041 lncRNA downstream 17975 40448168 ~ 40449823 (-) False G606842
TU691039 lncRNA downstream 17975 40449029 ~ 40449823 (-) False G606842
TU691040 lncRNA downstream 17975 40449262 ~ 40449823 (-) False G606842
TU691038 lncRNA downstream 17975 40449456 ~ 40449823 (-) True G606842
TU691060 lncRNA upstream 122 40468171 ~ 40468455 (-) True G606854
TU691081 lncRNA upstream 23589 40491638 ~ 40491878 (-) True G606875
TU691084 lncRNA upstream 25828 40493877 ~ 40506465 (-) True G606877
TU691092 lncRNA upstream 45991 40514040 ~ 40514256 (-) True G606885
TU691097 lncRNA upstream 48431 40516480 ~ 40516915 (-) True G606890
XM_021609248.2 mRNA downstream 13153 40452385 ~ 40454645 (-) True LOC110527750
XM_036983244.1 mRNA downstream 28744 40418035 ~ 40439054 (-) True LOC110527748
XM_036983243.1 mRNA downstream 39397 40418035 ~ 40428401 (-) False LOC110527748
XM_036983241.1 mRNA downstream 39550 40418035 ~ 40428248 (-) False LOC110527748
XM_036983242.1 mRNA downstream 39551 40418035 ~ 40428247 (-) False LOC110527748
XM_021609251.2 mRNA upstream 39693 40507742 ~ 40513295 (-) True LOC110527754
XM_021609252.2 mRNA upstream 92309 40560358 ~ 40562952 (-) False LOC110527755
XM_036984481.1 mRNA upstream 92309 40560358 ~ 40562952 (-) False LOC110527755
XM_021609253.2 mRNA upstream 117859 40585908 ~ 40596388 (-) False LOC110527756
XM_021609254.2 mRNA upstream 135402 40603451 ~ 40612049 (-) False LOC110527758
TU690660 other downstream 243631 40223555 ~ 40224167 (-) True LOC110527741
TU690234 other downstream 626467 39838891 ~ 39841331 (-) True G606135
TU689636 other downstream 1398970 39063005 ~ 39068828 (-) True LOC110527723
TU688474 other downstream 1828398 38602330 ~ 38639400 (-) True G604484
TU688480 other downstream 1870279 38590868 ~ 38597519 (-) True G604485
TU691182 other upstream 161200 40629249 ~ 40629880 (-) True G606973
TU692184 other upstream 688621 41156670 ~ 41348899 (-) False LOC110527764
TU692185 other upstream 688621 41156670 ~ 41348899 (-) False LOC110527764
TU692186 other upstream 688621 41156670 ~ 41348899 (-) False LOC110527764
TU692187 other upstream 688621 41156670 ~ 41348899 (-) False LOC110527764

Expression Profile