RNA id: TU691097



Basic Information


Item Value
RNA id TU691097
length 436
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G606890
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40516480 ~ 40516915 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CATCAGTGGCGTCACCAACGAGTCTCGGACCAGGCACGTTCCTGGACAGGGAGCTGTACGGATCTGGATATcgccatacagaaatgttttgatcATTCTCATTGGGCCTTAAAAATTGAGAAACTATCCTGAACCTTTCGGTATGTTGTCTTGTGTGGCTTTTCCCTTTCCCTATTTTGTACCGTAGCAGTAGTCAGAGGGGTTGGCTGAGTAGAACAGGGCAGGGTGGGTCACATTGTGTGCCGCACCAGAGCAAGATTGTAGTCTGGGAGGGTAACCTACCTGAGGGGAGGCTTTGTGTCGACATAATCCGGGAAATCATGCAGTCTGTGTGGGAAAATGTGTCTTATCCATGTTAACCCATGCGTTTAAAATTAAACTTACCTTGAGCATACTTGCCTGTCCTGGCCTTCTGTGTTGGGGTTGAGTGCTGGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU691092 lncRNA downstream 2224 40514040 ~ 40514256 (-) True G606885
TU691084 lncRNA downstream 10015 40493877 ~ 40506465 (-) True G606877
TU691081 lncRNA downstream 24602 40491638 ~ 40491878 (-) True G606875
TU691060 lncRNA downstream 48025 40468171 ~ 40468455 (-) True G606854
TU691059 lncRNA downstream 48431 40467798 ~ 40468049 (-) True G606853
TU691098 lncRNA upstream 337 40517252 ~ 40517621 (-) True G606891
TU691101 lncRNA upstream 2786 40519701 ~ 40520774 (-) True G606894
TU691125 lncRNA upstream 34175 40551090 ~ 40551371 (-) True G606916
TU691126 lncRNA upstream 34828 40551743 ~ 40552055 (-) True G606917
TU691094 lncRNA upstream 35902 40552817 ~ 40553207 (-) True G606887
XM_021609251.2 mRNA downstream 3185 40507742 ~ 40513295 (-) True LOC110527754
XM_021609248.2 mRNA downstream 61835 40452385 ~ 40454645 (-) True LOC110527750
XM_036983244.1 mRNA downstream 77426 40418035 ~ 40439054 (-) True LOC110527748
XM_036983243.1 mRNA downstream 88079 40418035 ~ 40428401 (-) False LOC110527748
XM_036983241.1 mRNA downstream 88232 40418035 ~ 40428248 (-) False LOC110527748
XM_021609252.2 mRNA upstream 43443 40560358 ~ 40562952 (-) False LOC110527755
XM_036984481.1 mRNA upstream 43443 40560358 ~ 40562952 (-) False LOC110527755
XM_021609253.2 mRNA upstream 68993 40585908 ~ 40596388 (-) False LOC110527756
XM_021609254.2 mRNA upstream 86536 40603451 ~ 40612049 (-) False LOC110527758
XM_021609255.2 mRNA upstream 216977 40733892 ~ 40749263 (-) True slc25a55a
TU690660 other downstream 292313 40223555 ~ 40224167 (-) True LOC110527741
TU690234 other downstream 675149 39838891 ~ 39841331 (-) True G606135
TU689636 other downstream 1447652 39063005 ~ 39068828 (-) True LOC110527723
TU688474 other downstream 1877080 38602330 ~ 38639400 (-) True G604484
TU688480 other downstream 1918961 38590868 ~ 38597519 (-) True G604485
TU691182 other upstream 112334 40629249 ~ 40629880 (-) True G606973
TU692184 other upstream 639755 41156670 ~ 41348899 (-) False LOC110527764
TU692185 other upstream 639755 41156670 ~ 41348899 (-) False LOC110527764
TU692186 other upstream 639755 41156670 ~ 41348899 (-) False LOC110527764
TU692187 other upstream 639755 41156670 ~ 41348899 (-) False LOC110527764

Expression Profile