RNA id: TU691098



Basic Information


Item Value
RNA id TU691098
length 370
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G606891
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40517252 ~ 40517621 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AAAGAAGTAACATAATAAACACTGCTATAAAAATAGTATACTGCATTGACAAAATTGCAAATTTGAGTTGTAACAGTAAGAAACAAACTTTTGAGCTCCACAAGGGTGCaaggcagggcagaacagagctgTGCTAAATAGACCAAATGAAAACAAACCATACAGACAATTCATCGGAATCACGTGCAGCCTTTGCGCCTACACAACCTTTAGACTGTGCCCAGATGCAACTCCACCAACCCCGCGCCAACCAGACAATGTTCAGCTGAACCAGGCCCCTAGGCCGGCCCGGCACATCTATACATGGTACCCAGTCAGACTTTATACCGTTCCTCTGGCCAGAGAAACGCCCTCTTCTCCCCCAATGGTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU691097 lncRNA downstream 337 40516480 ~ 40516915 (-) True G606890
TU691092 lncRNA downstream 2996 40514040 ~ 40514256 (-) True G606885
TU691084 lncRNA downstream 10787 40493877 ~ 40506465 (-) True G606877
TU691081 lncRNA downstream 25374 40491638 ~ 40491878 (-) True G606875
TU691060 lncRNA downstream 48797 40468171 ~ 40468455 (-) True G606854
TU691101 lncRNA upstream 2080 40519701 ~ 40520774 (-) True G606894
TU691125 lncRNA upstream 33469 40551090 ~ 40551371 (-) True G606916
TU691126 lncRNA upstream 34122 40551743 ~ 40552055 (-) True G606917
TU691094 lncRNA upstream 35196 40552817 ~ 40553207 (-) True G606887
TU691095 lncRNA upstream 36049 40553670 ~ 40554099 (-) True G606888
XM_021609251.2 mRNA downstream 3957 40507742 ~ 40513295 (-) True LOC110527754
XM_021609248.2 mRNA downstream 62607 40452385 ~ 40454645 (-) True LOC110527750
XM_036983244.1 mRNA downstream 78198 40418035 ~ 40439054 (-) True LOC110527748
XM_036983243.1 mRNA downstream 88851 40418035 ~ 40428401 (-) False LOC110527748
XM_036983241.1 mRNA downstream 89004 40418035 ~ 40428248 (-) False LOC110527748
XM_021609252.2 mRNA upstream 42737 40560358 ~ 40562952 (-) False LOC110527755
XM_036984481.1 mRNA upstream 42737 40560358 ~ 40562952 (-) False LOC110527755
XM_021609253.2 mRNA upstream 68287 40585908 ~ 40596388 (-) False LOC110527756
XM_021609254.2 mRNA upstream 85830 40603451 ~ 40612049 (-) False LOC110527758
XM_021609255.2 mRNA upstream 216271 40733892 ~ 40749263 (-) True slc25a55a
TU690660 other downstream 293085 40223555 ~ 40224167 (-) True LOC110527741
TU690234 other downstream 675921 39838891 ~ 39841331 (-) True G606135
TU689636 other downstream 1448424 39063005 ~ 39068828 (-) True LOC110527723
TU688474 other downstream 1877852 38602330 ~ 38639400 (-) True G604484
TU688480 other downstream 1919733 38590868 ~ 38597519 (-) True G604485
TU691182 other upstream 111628 40629249 ~ 40629880 (-) True G606973
TU692184 other upstream 639049 41156670 ~ 41348899 (-) False LOC110527764
TU692185 other upstream 639049 41156670 ~ 41348899 (-) False LOC110527764
TU692186 other upstream 639049 41156670 ~ 41348899 (-) False LOC110527764
TU692187 other upstream 639049 41156670 ~ 41348899 (-) False LOC110527764

Expression Profile