RNA id: TU691126


Basic Information

Item Value
RNA id TU691126
length 313
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G606917
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40551743 ~ 40552055 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

acatttacatgagtattcagaccctttactcagtacattgctgaagcacctttggcgatTACAGACTCAAATCCTCTTGGGTatcacgctacaagcttggcacacctgtatttgggaagtttttcttgttcttctctgcagatcctcacaagCTCTGTATAGAACTGAatagcacagctattttcaggtctctctagagatgttcgatcgggttcatttcgagacttgtcccgaagccactcctgcattgtcttggctctgtgcttaggttcattgtcctgttggaaggtgaaccttcccctCAGTCTGAGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU691125 lncRNA downstream 372 40551090 ~ 40551371 (-) True G606916
TU691101 lncRNA downstream 30969 40519701 ~ 40520774 (-) True G606894
TU691098 lncRNA downstream 34122 40517252 ~ 40517621 (-) True G606891
TU691097 lncRNA downstream 34828 40516480 ~ 40516915 (-) True G606890
TU691092 lncRNA downstream 37487 40514040 ~ 40514256 (-) True G606885
TU691094 lncRNA upstream 762 40552817 ~ 40553207 (-) True G606887
TU691095 lncRNA upstream 1615 40553670 ~ 40554099 (-) True G606888
TU691128 lncRNA upstream 7089 40559144 ~ 40559419 (-) True G606919
TU691131 lncRNA upstream 9595 40561650 ~ 40561879 (-) True LOC110527755
TU691133 lncRNA upstream 12853 40564908 ~ 40565357 (-) True G606924
XM_021609251.2 mRNA downstream 38448 40507742 ~ 40513295 (-) True LOC110527754
XM_021609248.2 mRNA downstream 97098 40452385 ~ 40454645 (-) True LOC110527750
XM_036983244.1 mRNA downstream 112689 40418035 ~ 40439054 (-) True LOC110527748
XM_036983243.1 mRNA downstream 123342 40418035 ~ 40428401 (-) False LOC110527748
XM_036983241.1 mRNA downstream 123495 40418035 ~ 40428248 (-) False LOC110527748
XM_021609252.2 mRNA upstream 8303 40560358 ~ 40562952 (-) False LOC110527755
XM_036984481.1 mRNA upstream 8303 40560358 ~ 40562952 (-) False LOC110527755
XM_021609253.2 mRNA upstream 33853 40585908 ~ 40596388 (-) False LOC110527756
XM_021609254.2 mRNA upstream 51396 40603451 ~ 40612049 (-) False LOC110527758
XM_021609255.2 mRNA upstream 181837 40733892 ~ 40749263 (-) True slc25a55a
TU690660 other downstream 327576 40223555 ~ 40224167 (-) True LOC110527741
TU690234 other downstream 710412 39838891 ~ 39841331 (-) True G606135
TU689636 other downstream 1482915 39063005 ~ 39068828 (-) True LOC110527723
TU688474 other downstream 1912343 38602330 ~ 38639400 (-) True G604484
TU688480 other downstream 1954224 38590868 ~ 38597519 (-) True G604485
TU691182 other upstream 77194 40629249 ~ 40629880 (-) True G606973
TU692184 other upstream 604615 41156670 ~ 41348899 (-) False LOC110527764
TU692185 other upstream 604615 41156670 ~ 41348899 (-) False LOC110527764
TU692186 other upstream 604615 41156670 ~ 41348899 (-) False LOC110527764
TU692187 other upstream 604615 41156670 ~ 41348899 (-) False LOC110527764

Expression Profile