RNA id: TU691701



Basic Information


Item Value
RNA id TU691701
length 309
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G607472
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40991118 ~ 40991426 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtgtgttactaatggttttctttgagactgtggtcccagctgtcttcaggtcattgaccaggtcctgccgtgtagttctgggctgatccctcaccttcctcatgatcattgatgccccacgaggtgagatcttgcatggagccccagaccgattgacagtcatcttgaacttcttccattttctaataattgcgccaacagttgttgccttctcaccaagctgcttgcctattgtcctgttgcccatcccagccttgtgcaggtctacaattttatccctgatgtccttacacagctctctggtcttgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU691683 lncRNA upstream 10013 40980769 ~ 40981105 (+) True G607454
TU691613 lncRNA upstream 57775 40933136 ~ 40933343 (+) True G607386
TU691527 lncRNA upstream 119614 40871113 ~ 40871504 (+) True G607302
TU691526 lncRNA upstream 121117 40869688 ~ 40870001 (+) True G607301
TU691489 lncRNA upstream 144013 40846854 ~ 40847105 (+) True G607264
TU691736 lncRNA downstream 27902 41019328 ~ 41019687 (+) True G607506
TU691739 lncRNA downstream 29201 41020627 ~ 41020885 (+) True G607509
TU691749 lncRNA downstream 39875 41031301 ~ 41031693 (+) True G607519
TU691764 lncRNA downstream 49199 41040625 ~ 41040955 (+) True G607534
TU691770 lncRNA downstream 54200 41045626 ~ 41045826 (+) True G607540
XM_021609260.2 mRNA upstream 207901 40778742 ~ 40783217 (+) False si:ch211-105j21.9
XM_021609266.2 mRNA downstream 369763 41361189 ~ 41411312 (+) True ppm1j
XM_021609267.2 mRNA downstream 422977 41414403 ~ 41439948 (+) True rhoca
XM_036983254.1 mRNA downstream 494262 41485688 ~ 41497176 (+) False st7l
XM_021609270.2 mRNA downstream 494262 41485688 ~ 41503766 (+) False st7l
XM_021609271.2 mRNA downstream 494262 41485688 ~ 41503766 (+) True st7l
TU691186 other upstream 356679 40634181 ~ 40634439 (+) True G606977
TU690810 other upstream 550486 40439100 ~ 40440632 (+) True LOC110527751
TU690594 other upstream 759893 40230885 ~ 40231225 (+) True G606469
TU690586 other upstream 766947 40223175 ~ 40224171 (+) True G606464
TU690574 other upstream 784221 40206569 ~ 40206897 (+) True G606452
TU692153 other downstream 471398 41462824 ~ 41463169 (+) True G607904
TU692673 other downstream 835785 41827211 ~ 41830808 (+) True G608390
TU693833 other downstream 1829530 42820956 ~ 42821245 (+) True G609436
TU694950 other downstream 2418965 43410391 ~ 43410806 (+) True G610436
TU695128 other downstream 2592594 43584020 ~ 43584896 (+) True G610563

Expression Profile