RNA id: TU691842



Basic Information


Item Value
RNA id TU691842
length 264
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G607612
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 41097375 ~ 41097638 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtccaggggtatcgtcggacggggccacagtgtctcccgacccctccagtctcagcctccagtatttatgctgcaatagtttatgtgtcgtggggctagggtcagtctgttatatctggagtatttctcctgtcttatctggtgtcctttgtgaatttaagtatgctctctctaattctctctctttatttctctcttttttctctcttttctttctttctttctttctctctcttggaggacctgagccctaggaccatgcct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU691835 lncRNA upstream 4890 41092272 ~ 41092485 (+) True G607605
TU691826 lncRNA upstream 11538 41085262 ~ 41085837 (+) True G607596
TU691807 lncRNA upstream 25711 41071070 ~ 41071664 (+) True G607577
TU691770 lncRNA upstream 51549 41045626 ~ 41045826 (+) True G607540
TU691764 lncRNA upstream 56420 41040625 ~ 41040955 (+) True G607534
TU691911 lncRNA downstream 46765 41144403 ~ 41144622 (+) True G607679
TU691926 lncRNA downstream 59054 41156692 ~ 41157761 (+) False G607693
TU691927 lncRNA downstream 59054 41156692 ~ 41157761 (+) True G607693
TU692044 lncRNA downstream 214917 41312555 ~ 41314869 (+) True G607805
TU692132 lncRNA downstream 345904 41443542 ~ 41445386 (+) False G607890
XM_021609260.2 mRNA upstream 314158 40778742 ~ 40783217 (+) False si:ch211-105j21.9
XM_021609266.2 mRNA downstream 263551 41361189 ~ 41411312 (+) True ppm1j
XM_021609267.2 mRNA downstream 316765 41414403 ~ 41439948 (+) True rhoca
XM_036983254.1 mRNA downstream 388050 41485688 ~ 41497176 (+) False st7l
XM_021609270.2 mRNA downstream 388050 41485688 ~ 41503766 (+) False st7l
XM_021609271.2 mRNA downstream 388050 41485688 ~ 41503766 (+) True st7l
TU691186 other upstream 462936 40634181 ~ 40634439 (+) True G606977
TU690810 other upstream 656743 40439100 ~ 40440632 (+) True LOC110527751
TU690594 other upstream 866150 40230885 ~ 40231225 (+) True G606469
TU690586 other upstream 873204 40223175 ~ 40224171 (+) True G606464
TU690574 other upstream 890478 40206569 ~ 40206897 (+) True G606452
TU692153 other downstream 365186 41462824 ~ 41463169 (+) True G607904
TU692673 other downstream 729573 41827211 ~ 41830808 (+) True G608390
TU693833 other downstream 1723318 42820956 ~ 42821245 (+) True G609436
TU694950 other downstream 2312753 43410391 ~ 43410806 (+) True G610436
TU695128 other downstream 2486382 43584020 ~ 43584896 (+) True G610563

Expression Profile