RNA id: TU692044



Basic Information


Item Value
RNA id TU692044
length 206
lncRNA type intronic
GC content 0.41
exon number 2
gene id G607805
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 41312555 ~ 41314869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tttgtttttctatgttttggggcagttctatgttttcggcctagtatggttctcaatcagaggcaggtgtcattagttgtctctgattgagaatcatacttaggtagcctgggttgcactgtttgtttgtgggtgattgtctatgttgatggcttgtttcagcacaggtctcattttgtagcttcacggtcgtatttggtttattg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU691926 lncRNA upstream 154794 41156692 ~ 41157761 (+) False G607693
TU691927 lncRNA upstream 154794 41156692 ~ 41157761 (+) True G607693
TU691911 lncRNA upstream 167933 41144403 ~ 41144622 (+) True G607679
TU691842 lncRNA upstream 214917 41097375 ~ 41097638 (+) True G607612
TU691835 lncRNA upstream 220070 41092272 ~ 41092485 (+) True G607605
TU692132 lncRNA downstream 128673 41443542 ~ 41445386 (+) False G607890
TU692135 lncRNA downstream 128673 41443542 ~ 41444260 (+) False G607890
TU692131 lncRNA downstream 129147 41444016 ~ 41445386 (+) False G607890
TU692133 lncRNA downstream 129147 41444016 ~ 41444260 (+) True G607890
TU692140 lncRNA downstream 131000 41445869 ~ 41446193 (+) True G607891
XM_021609260.2 mRNA upstream 529338 40778742 ~ 40783217 (+) False si:ch211-105j21.9
XM_021609266.2 mRNA downstream 46320 41361189 ~ 41411312 (+) True ppm1j
XM_021609267.2 mRNA downstream 99534 41414403 ~ 41439948 (+) True rhoca
XM_036983254.1 mRNA downstream 170819 41485688 ~ 41497176 (+) False st7l
XM_021609270.2 mRNA downstream 170819 41485688 ~ 41503766 (+) False st7l
XM_021609271.2 mRNA downstream 170819 41485688 ~ 41503766 (+) True st7l
TU691186 other upstream 678116 40634181 ~ 40634439 (+) True G606977
TU690810 other upstream 871923 40439100 ~ 40440632 (+) True LOC110527751
TU690594 other upstream 1081330 40230885 ~ 40231225 (+) True G606469
TU690586 other upstream 1088384 40223175 ~ 40224171 (+) True G606464
TU690574 other upstream 1105658 40206569 ~ 40206897 (+) True G606452
TU692153 other downstream 147955 41462824 ~ 41463169 (+) True G607904
TU692673 other downstream 512342 41827211 ~ 41830808 (+) True G608390
TU693833 other downstream 1506087 42820956 ~ 42821245 (+) True G609436
TU694950 other downstream 2095522 43410391 ~ 43410806 (+) True G610436
TU695128 other downstream 2269151 43584020 ~ 43584896 (+) True G610563

Expression Profile