RNA id: TU694523



Basic Information


Item Value
RNA id TU694523
length 323
RNA type TUCP
GC content 0.53
exon number 1
gene id G610047
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42835747 ~ 42836069 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cctttgtgtatgataacgcaggagggtcacaaggagaagattagtcttttccttattgattctcctgcgtattctgtggtgctaggcctaccctggttagcttgtcataaccccactgtttcttggccacagagggctctcatgGGGTGGTCGCGAGactgctcaggtaggtgtttaggggtttccttTGGTGcaactacggtggaaagtccagaccaggtctccaccgtgcgcattccccccgacTATGCCGATTTGGCtttcgccttctgtaaaaaggcgactcaattaccaccccatcgacgggggggattgtgcgatag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU694522 lncRNA downstream 1477 42833577 ~ 42834270 (-) True G610046
TU694516 lncRNA downstream 6818 42828689 ~ 42828929 (-) True G610040
TU694500 lncRNA downstream 31979 42803477 ~ 42803768 (-) True G610025
TU694499 lncRNA downstream 36218 42799328 ~ 42799529 (-) True G610024
TU694455 lncRNA downstream 68356 42760566 ~ 42767391 (-) True G609980
TU694525 lncRNA upstream 4989 42841058 ~ 42841287 (-) True G610049
TU694535 lncRNA upstream 16373 42852442 ~ 42852781 (-) True G610058
TU694572 lncRNA upstream 54058 42890127 ~ 42890427 (-) True G610084
TU694578 lncRNA upstream 73220 42909289 ~ 42909517 (-) True G610090
TU694581 lncRNA upstream 77025 42913094 ~ 42913334 (-) True G610093
XM_036984482.1 mRNA downstream 20710 42805342 ~ 42815037 (-) True LOC110527110
XM_021608268.2 mRNA downstream 27659 42805342 ~ 42808088 (-) False LOC110527110
XM_021609307.2 mRNA downstream 42709 42775477 ~ 42793038 (-) True LOC110527792
XM_021609305.2 mRNA downstream 61748 42768087 ~ 42773999 (-) True edem1
LOC110527780 mRNA downstream 910139 41880174 ~ 41925608 (-) True LOC110527780
XM_021609308.2 mRNA upstream 6644 42842713 ~ 42845808 (-) True si:ch73-361p23.3
XM_021609311.2 mRNA upstream 48887 42884956 ~ 42887226 (-) True cplane2
XM_021609312.2 mRNA upstream 52549 42888618 ~ 42889492 (-) True LOC110527797
XM_021609313.2 mRNA upstream 55241 42891310 ~ 42906626 (-) False LOC110527798
XM_021609314.2 mRNA upstream 55241 42891310 ~ 42906626 (-) False LOC110527798
TU693245 other downstream 810043 41968569 ~ 42025704 (-) True G608900
TU693231 other downstream 884503 41944571 ~ 41951244 (-) True G608888
TU692186 other downstream 1486848 41156670 ~ 41348899 (-) False LOC110527764
TU694690 other upstream 271058 43107127 ~ 43162969 (-) False G610182
TU694686 other upstream 272539 43108608 ~ 43112038 (-) False G610182
TU694702 other upstream 277079 43113148 ~ 43116144 (-) True G610190
TU694694 other upstream 291742 43127811 ~ 43149026 (-) False G610183
TU694691 other upstream 311431 43147500 ~ 43167320 (-) True G610183

Expression Profile