RNA id: TU694870



Basic Information


Item Value
RNA id TU694870
length 238
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G610356
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43353802 ~ 43354039 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTCTAATTCATTCTATCATTCATGGATCCATTTTATTGTTGTAGCAAAATACTTAATAGGACAAAAATCTATGCCCAACCCCACTGAACAAGACAAGCCATTTTTAACTCAGCATGGTCACGTTCTCCTCATGATTTCATGCTTTCCTTTCTCCCATGCTGCCTAAGATGGGGCCCTCACTCCTGAGCAATACGATCTTAGCTACATCTGCACCCAGCAGCCACATCCTGCCCATTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU694767 lncRNA downstream 110353 43243199 ~ 43243449 (-) True G610254
TU694676 lncRNA downstream 231090 43106030 ~ 43122712 (-) False G610180
TU694677 lncRNA downstream 231090 43117924 ~ 43122712 (-) True G610180
TU694679 lncRNA downstream 239495 43110853 ~ 43114307 (-) False G610182
TU694620 lncRNA downstream 368319 42984725 ~ 42985483 (-) True G610132
TU694873 lncRNA upstream 1331 43355370 ~ 43355588 (-) True G610359
TU694896 lncRNA upstream 20237 43374276 ~ 43374481 (-) True G610382
TU694909 lncRNA upstream 29953 43383992 ~ 43384236 (-) True G610395
TU694914 lncRNA upstream 32390 43386429 ~ 43386700 (-) True G610400
TU694917 lncRNA upstream 33045 43387084 ~ 43387309 (-) True G610403
XM_036983280.1 mRNA downstream 24235 43034642 ~ 43329567 (-) False LOC110527806
XM_036983281.1 mRNA downstream 24235 43034642 ~ 43329567 (-) False LOC110527806
XM_036983283.1 mRNA downstream 24235 43034642 ~ 43329567 (-) True LOC110527806
XM_036983282.1 mRNA downstream 24236 43034642 ~ 43329566 (-) False LOC110527806
XM_036983284.1 mRNA downstream 325986 43003314 ~ 43027816 (-) True LOC110527807
XM_021609333.2 mRNA upstream 74340 43428379 ~ 43433682 (-) True LOC110527809
XM_021609339.2 mRNA upstream 82841 43436880 ~ 43438762 (-) False LOC110527812
XM_021609338.2 mRNA upstream 82841 43436880 ~ 43438771 (-) False LOC110527812
XM_021609341.2 mRNA upstream 82841 43436880 ~ 43439076 (-) False LOC110527812
XM_021609337.2 mRNA upstream 85175 43439214 ~ 43449075 (-) False LOC110527811
TU694691 other downstream 186482 43147500 ~ 43167320 (-) True G610183
TU694690 other downstream 190833 43107127 ~ 43162969 (-) False G610182
TU695019 other upstream 81539 43435578 ~ 43438743 (-) False LOC110527812
TU695015 other upstream 81850 43435889 ~ 43438743 (-) False LOC110527812
TU695007 other upstream 82844 43436883 ~ 43438812 (-) False LOC110527812
TU695009 other upstream 82844 43436883 ~ 43438812 (-) False LOC110527812
TU695010 other upstream 82844 43436883 ~ 43438913 (-) False LOC110527812

Expression Profile