RNA id: TU694896


Basic Information

Item Value
RNA id TU694896
length 206
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G610382
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43374276 ~ 43374481 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cataaaaaTAGTCATTTTTACTTTTGCGGATAATAACATTTTTGGGACATTTCTGACACGGACAAAATTCCCCAAgcacttcccaattgtttgtgcagttcaCGTCTGCAGCTCATCTCCCGTCAGAACAGGATCTGCACACGTGTTCACATTTTCCATTCAACATTTCTATTGTAGCgtactgtatgtatggagcataatatatt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU694873 lncRNA downstream 18688 43355370 ~ 43355588 (-) True G610359
TU694870 lncRNA downstream 20237 43353802 ~ 43354039 (-) True G610356
TU694767 lncRNA downstream 130827 43243199 ~ 43243449 (-) True G610254
TU694676 lncRNA downstream 251564 43106030 ~ 43122712 (-) False G610180
TU694909 lncRNA upstream 9511 43383992 ~ 43384236 (-) True G610395
TU694914 lncRNA upstream 11948 43386429 ~ 43386700 (-) True G610400
TU694917 lncRNA upstream 12603 43387084 ~ 43387309 (-) True G610403
TU694942 lncRNA upstream 31502 43405983 ~ 43406898 (-) True G610428
TU694953 lncRNA upstream 37884 43412365 ~ 43412605 (-) True G610439
XM_036983280.1 mRNA downstream 44709 43034642 ~ 43329567 (-) False LOC110527806
XM_036983281.1 mRNA downstream 44709 43034642 ~ 43329567 (-) False LOC110527806
XM_036983283.1 mRNA downstream 44709 43034642 ~ 43329567 (-) True LOC110527806
XM_036983282.1 mRNA downstream 44710 43034642 ~ 43329566 (-) False LOC110527806
XM_036983284.1 mRNA downstream 346460 43003314 ~ 43027816 (-) True LOC110527807
XM_021609333.2 mRNA upstream 53898 43428379 ~ 43433682 (-) True LOC110527809
XM_021609339.2 mRNA upstream 62399 43436880 ~ 43438762 (-) False LOC110527812
XM_021609338.2 mRNA upstream 62399 43436880 ~ 43438771 (-) False LOC110527812
XM_021609341.2 mRNA upstream 62399 43436880 ~ 43439076 (-) False LOC110527812
XM_021609337.2 mRNA upstream 64733 43439214 ~ 43449075 (-) False LOC110527811
TU694691 other downstream 206956 43147500 ~ 43167320 (-) True G610183
TU694690 other downstream 211307 43107127 ~ 43162969 (-) False G610182
TU695019 other upstream 61097 43435578 ~ 43438743 (-) False LOC110527812
TU695015 other upstream 61408 43435889 ~ 43438743 (-) False LOC110527812
TU695007 other upstream 62402 43436883 ~ 43438812 (-) False LOC110527812
TU695009 other upstream 62402 43436883 ~ 43438812 (-) False LOC110527812
TU695010 other upstream 62402 43436883 ~ 43438913 (-) False LOC110527812

Expression Profile