RNA id: TU694953


Basic Information

Item Value
RNA id TU694953
length 241
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G610439
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43412365 ~ 43412605 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tgagtccatggtggcgtagtgtgttactgatggtaggctttgttactttggtcccagctctctgcaggtcattcactaggtccccccgtgtcgttctgggatttttgctcactgttcttgtgatcattttgatcccatggggtgagatcttgcgtggagccccagatcgagggagattatcagtggtcttgtatgtcttccatttcctaataatcgctcccacagttgatttcttcaaacc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU694942 lncRNA downstream 5467 43405983 ~ 43406898 (-) True G610428
TU694917 lncRNA downstream 25056 43387084 ~ 43387309 (-) True G610403
TU694914 lncRNA downstream 25665 43386429 ~ 43386700 (-) True G610400
TU694909 lncRNA downstream 28129 43383992 ~ 43384236 (-) True G610395
TU694896 lncRNA downstream 37884 43374276 ~ 43374481 (-) True G610382
TU694962 lncRNA upstream 9205 43421810 ~ 43422024 (-) True G610448
TU694967 lncRNA upstream 11034 43423639 ~ 43423982 (-) True G610453
TU695016 lncRNA upstream 24278 43436883 ~ 43438743 (-) False LOC110527812
TU695033 lncRNA upstream 37596 43450201 ~ 43450487 (-) True G610492
TU695036 lncRNA upstream 40510 43453115 ~ 43453406 (-) True G610495
XM_036983280.1 mRNA downstream 82798 43034642 ~ 43329567 (-) False LOC110527806
XM_036983281.1 mRNA downstream 82798 43034642 ~ 43329567 (-) False LOC110527806
XM_036983283.1 mRNA downstream 82798 43034642 ~ 43329567 (-) True LOC110527806
XM_036983282.1 mRNA downstream 82799 43034642 ~ 43329566 (-) False LOC110527806
XM_036983284.1 mRNA downstream 384549 43003314 ~ 43027816 (-) True LOC110527807
XM_021609333.2 mRNA upstream 15774 43428379 ~ 43433682 (-) True LOC110527809
XM_021609339.2 mRNA upstream 24275 43436880 ~ 43438762 (-) False LOC110527812
XM_021609338.2 mRNA upstream 24275 43436880 ~ 43438771 (-) False LOC110527812
XM_021609341.2 mRNA upstream 24275 43436880 ~ 43439076 (-) False LOC110527812
XM_021609337.2 mRNA upstream 26609 43439214 ~ 43449075 (-) False LOC110527811
TU694691 other downstream 245045 43147500 ~ 43167320 (-) True G610183
TU694690 other downstream 249396 43107127 ~ 43162969 (-) False G610182
TU695019 other upstream 22973 43435578 ~ 43438743 (-) False LOC110527812
TU695015 other upstream 23284 43435889 ~ 43438743 (-) False LOC110527812
TU695007 other upstream 24278 43436883 ~ 43438812 (-) False LOC110527812
TU695009 other upstream 24278 43436883 ~ 43438812 (-) False LOC110527812
TU695010 other upstream 24278 43436883 ~ 43438913 (-) False LOC110527812

Expression Profile