RNA id: TU694962


Basic Information

Item Value
RNA id TU694962
length 215
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G610448
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43421810 ~ 43422024 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tcatgattgccttgctgcaaaggaaccactactaagagcccttacacagccggaaggtgtgttgggtcattgtcctgttgaaaaacaaatgatagtcccactaagagcaaaccagatgggatggcgtatcgctggaaaaggctgtggtagccatgctggttaagtgtgccttgaattcgaaataaatcacagacagtgtcacctgcaaagttccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU694953 lncRNA downstream 9205 43412365 ~ 43412605 (-) True G610439
TU694942 lncRNA downstream 14912 43405983 ~ 43406898 (-) True G610428
TU694917 lncRNA downstream 34501 43387084 ~ 43387309 (-) True G610403
TU694914 lncRNA downstream 35110 43386429 ~ 43386700 (-) True G610400
TU694909 lncRNA downstream 37574 43383992 ~ 43384236 (-) True G610395
TU694967 lncRNA upstream 1615 43423639 ~ 43423982 (-) True G610453
TU695016 lncRNA upstream 14859 43436883 ~ 43438743 (-) False LOC110527812
TU695033 lncRNA upstream 28177 43450201 ~ 43450487 (-) True G610492
TU695036 lncRNA upstream 31091 43453115 ~ 43453406 (-) True G610495
TU695041 lncRNA upstream 47682 43469706 ~ 43469914 (-) True G610500
XM_036983280.1 mRNA downstream 92243 43034642 ~ 43329567 (-) False LOC110527806
XM_036983281.1 mRNA downstream 92243 43034642 ~ 43329567 (-) False LOC110527806
XM_036983283.1 mRNA downstream 92243 43034642 ~ 43329567 (-) True LOC110527806
XM_036983282.1 mRNA downstream 92244 43034642 ~ 43329566 (-) False LOC110527806
XM_036983284.1 mRNA downstream 393994 43003314 ~ 43027816 (-) True LOC110527807
XM_021609333.2 mRNA upstream 6355 43428379 ~ 43433682 (-) True LOC110527809
XM_021609339.2 mRNA upstream 14856 43436880 ~ 43438762 (-) False LOC110527812
XM_021609338.2 mRNA upstream 14856 43436880 ~ 43438771 (-) False LOC110527812
XM_021609341.2 mRNA upstream 14856 43436880 ~ 43439076 (-) False LOC110527812
XM_021609337.2 mRNA upstream 17190 43439214 ~ 43449075 (-) False LOC110527811
TU694691 other downstream 254490 43147500 ~ 43167320 (-) True G610183
TU694690 other downstream 258841 43107127 ~ 43162969 (-) False G610182
TU695019 other upstream 13554 43435578 ~ 43438743 (-) False LOC110527812
TU695015 other upstream 13865 43435889 ~ 43438743 (-) False LOC110527812
TU695007 other upstream 14859 43436883 ~ 43438812 (-) False LOC110527812
TU695009 other upstream 14859 43436883 ~ 43438812 (-) False LOC110527812
TU695010 other upstream 14859 43436883 ~ 43438913 (-) False LOC110527812

Expression Profile