RNA id: TU694967



Basic Information


Item Value
RNA id TU694967
length 344
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G610453
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43423639 ~ 43423982 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


actttgttgtccttaagccattttgccacaactttggaagtatgcttgggatcattgtccatttggaagacccatttgagaccaagctgtTAACTGATGtcttgttgcttcaatatatccacatcattttcctacctcatgatgccatctattttgtgaagtgcaccagtcccacctgcagcaaaacacccccacaacaagatgctgccacctctgtgcttcacggttgggatggtgttcttcggcttacaagcctcctcctttttcctcctaacataacgatggtcattatagccacaCACGTtctatgtttgtttcatcagaccagaggacatttctccaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU694962 lncRNA downstream 1615 43421810 ~ 43422024 (-) True G610448
TU694953 lncRNA downstream 11034 43412365 ~ 43412605 (-) True G610439
TU694942 lncRNA downstream 16741 43405983 ~ 43406898 (-) True G610428
TU694917 lncRNA downstream 36330 43387084 ~ 43387309 (-) True G610403
TU694914 lncRNA downstream 36939 43386429 ~ 43386700 (-) True G610400
TU695016 lncRNA upstream 12901 43436883 ~ 43438743 (-) False LOC110527812
TU695033 lncRNA upstream 26219 43450201 ~ 43450487 (-) True G610492
TU695036 lncRNA upstream 29133 43453115 ~ 43453406 (-) True G610495
TU695041 lncRNA upstream 45724 43469706 ~ 43469914 (-) True G610500
TU695043 lncRNA upstream 46980 43470962 ~ 43471240 (-) True G610502
XM_036983280.1 mRNA downstream 94072 43034642 ~ 43329567 (-) False LOC110527806
XM_036983281.1 mRNA downstream 94072 43034642 ~ 43329567 (-) False LOC110527806
XM_036983283.1 mRNA downstream 94072 43034642 ~ 43329567 (-) True LOC110527806
XM_036983282.1 mRNA downstream 94073 43034642 ~ 43329566 (-) False LOC110527806
XM_036983284.1 mRNA downstream 395823 43003314 ~ 43027816 (-) True LOC110527807
XM_021609333.2 mRNA upstream 4397 43428379 ~ 43433682 (-) True LOC110527809
XM_021609339.2 mRNA upstream 12898 43436880 ~ 43438762 (-) False LOC110527812
XM_021609338.2 mRNA upstream 12898 43436880 ~ 43438771 (-) False LOC110527812
XM_021609341.2 mRNA upstream 12898 43436880 ~ 43439076 (-) False LOC110527812
XM_021609337.2 mRNA upstream 15232 43439214 ~ 43449075 (-) False LOC110527811
TU694691 other downstream 256319 43147500 ~ 43167320 (-) True G610183
TU694690 other downstream 260670 43107127 ~ 43162969 (-) False G610182
TU695019 other upstream 11596 43435578 ~ 43438743 (-) False LOC110527812
TU695015 other upstream 11907 43435889 ~ 43438743 (-) False LOC110527812
TU695007 other upstream 12901 43436883 ~ 43438812 (-) False LOC110527812
TU695009 other upstream 12901 43436883 ~ 43438812 (-) False LOC110527812
TU695010 other upstream 12901 43436883 ~ 43438913 (-) False LOC110527812

Expression Profile