RNA id: TU695898



Basic Information


Item Value
RNA id TU695898
length 374
lncRNA type intronic
GC content 0.41
exon number 2
gene id G611215
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43668413 ~ 43668921 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTactaacagtacagtagtatctgtacagtagtatctgtacAGTAGTAACGGTACAGTAGTAACGGTACAAaagtaacagtacagtagtaaccgtactgtagtaacagtacagtagtaaCCGTACAGTAGTAACCGTACAGtagtaacagtacagtagtaaCCGTACTGCTGTAACCGTACTGTTGTAACCGTACAGTAGTAACGGTACAGTAGTAACCGTACAGTAGTAACCGTACAGTAGTAACCGTACAGTAGTAACGGTACAGTAGTAACCGTACAGTAGTAACCGTACTGTTGTAACCGTAGTAACCGTACTGTTGTAACCGTACAGTACTAACAGTACAGTAGTAACGGTACAGTAGTAACGGTACAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU695896 lncRNA downstream 755 43666707 ~ 43667658 (-) True G611214
TU695818 lncRNA downstream 68295 43599887 ~ 43600118 (-) True G611167
TU695159 lncRNA downstream 190840 43477270 ~ 43477573 (-) True G610579
TU695043 lncRNA downstream 197173 43470962 ~ 43471240 (-) True G610502
TU695041 lncRNA downstream 198499 43469706 ~ 43469914 (-) True G610500
TU695960 lncRNA upstream 99437 43768358 ~ 43768591 (-) True G611275
TU696122 lncRNA upstream 365575 44034496 ~ 44034844 (-) True G611423
TU696169 lncRNA upstream 467264 44136185 ~ 44178737 (-) True LOC110527840
TU696170 lncRNA upstream 519924 44188845 ~ 44191529 (-) True G611470
TU696186 lncRNA upstream 531627 44200548 ~ 44200845 (-) True G611486
XM_021609352.2 mRNA downstream 4763 43645370 ~ 43663650 (-) True LOC110527821
XM_021609350.2 mRNA downstream 28776 43600549 ~ 43639637 (-) True skib
XM_036984431.1 mRNA downstream 71966 43582314 ~ 43596447 (-) True plch2b
XM_021609344.2 mRNA downstream 96090 43545876 ~ 43572323 (-) True brpf3a
XM_021609348.2 mRNA downstream 131376 43526702 ~ 43537037 (-) False LOC110527816
XR_005052582.1 mRNA upstream 1461 43670382 ~ 43823859 (-) False kaznb
XM_036983297.1 mRNA upstream 3795 43672716 ~ 43823854 (-) False kaznb
XM_036983298.1 mRNA upstream 4700 43673621 ~ 43823859 (-) True kaznb
XM_021609354.2 mRNA upstream 162770 43831691 ~ 43849517 (-) True prdm2b
XM_021609355.2 mRNA upstream 199859 43868780 ~ 43960544 (-) True LOC110527824
TU695139 other downstream 88449 43579093 ~ 43579964 (-) True G610570
TU695151 other downstream 131448 43526691 ~ 43536965 (-) False LOC110527816
TU696390 other upstream 815934 44484855 ~ 44485405 (-) False G611674
TU696391 other upstream 815934 44484855 ~ 44485752 (-) False G611674
TU698246 other upstream 2206044 45874965 ~ 45875700 (-) True G613411
TU700211 other upstream 3599402 47268323 ~ 47270071 (-) True LOC110527888
TU701964 other upstream 4818126 48487047 ~ 48529168 (-) True G616880

Expression Profile