RNA id: TU695960



Basic Information


Item Value
RNA id TU695960
length 204
lncRNA type intronic
GC content 0.49
exon number 2
gene id G611275
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43768358 ~ 43768591 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctctcctctattctgctctgctctcctctcctttcctcttctctcctctattctcctttgctctcctttcctcttctctcctctattctcctctgttctcctctcctttcatcttctctcctctattctcatctcctctcctttcctcttctctcctctattctcctcctctcttgtcctctcctctgctctcgtcTCCTCTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU695898 lncRNA downstream 99437 43668413 ~ 43668921 (-) True G611215
TU695896 lncRNA downstream 100700 43666707 ~ 43667658 (-) True G611214
TU695818 lncRNA downstream 168240 43599887 ~ 43600118 (-) True G611167
TU695159 lncRNA downstream 290785 43477270 ~ 43477573 (-) True G610579
TU695043 lncRNA downstream 297118 43470962 ~ 43471240 (-) True G610502
TU696122 lncRNA upstream 265905 44034496 ~ 44034844 (-) True G611423
TU696169 lncRNA upstream 367594 44136185 ~ 44178737 (-) True LOC110527840
TU696170 lncRNA upstream 420254 44188845 ~ 44191529 (-) True G611470
TU696186 lncRNA upstream 431957 44200548 ~ 44200845 (-) True G611486
TU696189 lncRNA upstream 436870 44205461 ~ 44205666 (-) True G611489
XM_036983294.1 mRNA downstream 16608 43663809 ~ 43751750 (-) False kaznb
XM_036983295.1 mRNA downstream 60261 43663809 ~ 43708097 (-) False kaznb
XM_036983296.1 mRNA downstream 71106 43663809 ~ 43697252 (-) False kaznb
XM_021609352.2 mRNA downstream 104708 43645370 ~ 43663650 (-) True LOC110527821
XM_021609350.2 mRNA downstream 128721 43600549 ~ 43639637 (-) True skib
XM_021609354.2 mRNA upstream 63100 43831691 ~ 43849517 (-) True prdm2b
XM_021609355.2 mRNA upstream 100189 43868780 ~ 43960544 (-) True LOC110527824
XM_021609361.2 mRNA upstream 200317 43968908 ~ 43976968 (-) False utp3
XM_021609360.2 mRNA upstream 200317 43968908 ~ 43976969 (-) True utp3
XM_021609363.2 mRNA upstream 211290 43979881 ~ 43984460 (-) False fam83e
TU695139 other downstream 188394 43579093 ~ 43579964 (-) True G610570
TU695151 other downstream 231393 43526691 ~ 43536965 (-) False LOC110527816
TU696390 other upstream 716264 44484855 ~ 44485405 (-) False G611674
TU696391 other upstream 716264 44484855 ~ 44485752 (-) False G611674
TU698246 other upstream 2106374 45874965 ~ 45875700 (-) True G613411
TU700211 other upstream 3499732 47268323 ~ 47270071 (-) True LOC110527888
TU701964 other upstream 4718456 48487047 ~ 48529168 (-) True G616880

Expression Profile