RNA id: TU696122



Basic Information


Item Value
RNA id TU696122
length 328
lncRNA type antisense_over
GC content 0.54
exon number 2
gene id G611423
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 44034496 ~ 44034844 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTGTCATGGTATTATTCATTGCAGCATTCCCTTCTTAAGTTTGGCTGTATTTGCCTGTCTGTCCTCACACCTCATCACTGTCCGAGCTCAGTGCGTCAGAGGTTGTGGTCAGCCCTGGTCAGAGGGGGGCGTCAGGTTCAGATTGCTGTCCCACACCCCTGGGGATGAGGTCAGGTTCAGATAGCCCATCTCCACAGGCTGTGTGGTCAGGGTAGAGCGTGGAGAGGTGAGTGAAGAGCGTGGAGAGGTGGCTTCCTCTGTGTGACTGGCCTTGCACCTATAGATGTTGTCCAAATGGCTTCTCATGTCAAATGCTCCAGGCAGAACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU695960 lncRNA downstream 265905 43768358 ~ 43768591 (-) True G611275
TU695898 lncRNA downstream 365575 43668413 ~ 43668921 (-) True G611215
TU695896 lncRNA downstream 366838 43666707 ~ 43667658 (-) True G611214
TU695818 lncRNA downstream 434378 43599887 ~ 43600118 (-) True G611167
TU695159 lncRNA downstream 556923 43477270 ~ 43477573 (-) True G610579
TU696169 lncRNA upstream 101341 44136185 ~ 44178737 (-) True LOC110527840
TU696170 lncRNA upstream 154001 44188845 ~ 44191529 (-) True G611470
TU696186 lncRNA upstream 165704 44200548 ~ 44200845 (-) True G611486
TU696189 lncRNA upstream 170617 44205461 ~ 44205666 (-) True G611489
TU696199 lncRNA upstream 188607 44223451 ~ 44223726 (-) True G611499
XM_021609365.2 mRNA downstream 33931 43987288 ~ 44000565 (-) True si:dkey-264d12.4
XM_021609367.2 mRNA downstream 38497 43987288 ~ 43995999 (-) False si:dkey-264d12.4
XM_021609362.2 mRNA downstream 49099 43979881 ~ 43985397 (-) True fam83e
XM_021609363.2 mRNA downstream 50036 43979881 ~ 43984460 (-) False fam83e
XM_021609360.2 mRNA downstream 57527 43968908 ~ 43976969 (-) True utp3
XM_036983305.1 mRNA upstream 21702 44056546 ~ 44061223 (-) False LOC110527833
XM_021609376.2 mRNA upstream 21702 44056546 ~ 44069338 (-) False LOC110527833
XM_036983302.1 mRNA upstream 21702 44056546 ~ 44069338 (-) False LOC110527833
XM_036983303.1 mRNA upstream 21702 44056546 ~ 44069338 (-) False LOC110527833
XM_036983304.1 mRNA upstream 21702 44056546 ~ 44069338 (-) False LOC110527833
TU695139 other downstream 454532 43579093 ~ 43579964 (-) True G610570
TU695151 other downstream 497531 43526691 ~ 43536965 (-) False LOC110527816
TU696390 other upstream 450011 44484855 ~ 44485405 (-) False G611674
TU696391 other upstream 450011 44484855 ~ 44485752 (-) False G611674
TU698246 other upstream 1840121 45874965 ~ 45875700 (-) True G613411
TU700211 other upstream 3233479 47268323 ~ 47270071 (-) True LOC110527888
TU701964 other upstream 4452203 48487047 ~ 48529168 (-) True G616880

Expression Profile