RNA id: TU695491



Basic Information


Item Value
RNA id TU695491
length 212
lncRNA type antisense_over
GC content 0.37
exon number 2
gene id G610879
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 44059107 ~ 44064534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AAGCAGGTTGAAAAAGCAGATCATGTGGTTGACATTGCACTAAGAAACCTATTACAaggatgtacagtggggagaacacgtatttgataacctgcaaaatcggcagtgtttcctacttacaaagcatgtaggggtctgtaatttttatcataggtacacttcaactgtgagagacagaatctaaaacaaaaatccagaaaatcacattgtat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU695367 lncRNA upstream 186484 43867202 ~ 43872623 (+) True G610764
TU695209 lncRNA upstream 227227 43829838 ~ 43831880 (+) False G610622
TU695210 lncRNA upstream 227227 43830860 ~ 43831880 (+) True G610622
TU695217 lncRNA upstream 385332 43623596 ~ 43673775 (+) False G610627
TU695216 lncRNA upstream 385332 43671731 ~ 43673775 (+) True G610627
TU695502 lncRNA downstream 5108 44069642 ~ 44071873 (+) False G610889
TU695503 lncRNA downstream 5108 44069642 ~ 44071873 (+) False G610889
TU695504 lncRNA downstream 5108 44069642 ~ 44071873 (+) True G610889
TU695521 lncRNA downstream 14794 44079328 ~ 44080120 (+) True G610902
TU695508 lncRNA downstream 33677 44098211 ~ 44102475 (+) True G610893
XM_021609372.2 mRNA upstream 23964 44002556 ~ 44035143 (+) False si:dkey-264d12.5
XM_021609368.2 mRNA upstream 23964 44002557 ~ 44035143 (+) False si:dkey-264d12.5
XM_021609369.2 mRNA upstream 23964 44002557 ~ 44035143 (+) False si:dkey-264d12.5
XM_021609370.2 mRNA upstream 23964 44002557 ~ 44035143 (+) False si:dkey-264d12.5
XM_021609371.2 mRNA upstream 23964 44002557 ~ 44035143 (+) False si:dkey-264d12.5
XM_021609378.2 mRNA downstream 21331 44085865 ~ 44092535 (+) False LOC110527834
XM_036983308.1 mRNA downstream 21331 44085865 ~ 44092535 (+) True LOC110527834
XR_002474166.2 mRNA downstream 99722 44164256 ~ 44178065 (+) False LOC110527839
XM_021609387.2 mRNA downstream 151000 44215534 ~ 44261277 (+) False mmel1
XM_021609394.2 mRNA downstream 212386 44276920 ~ 44290296 (+) False slc45a1
TU695458 other upstream 30879 44021849 ~ 44028228 (+) True si:dkey-264d12.5
TU695454 other upstream 52200 44002624 ~ 44006907 (+) False si:dkey-264d12.5
TU695211 other upstream 227227 43829004 ~ 43831880 (+) False G610622
TU695128 other upstream 474211 43584020 ~ 43584896 (+) True G610563
TU694950 other upstream 648301 43410391 ~ 43410806 (+) True G610436
TU698525 other downstream 2214200 46278734 ~ 46279333 (+) True G613664
TU699203 other downstream 2567588 46632122 ~ 46637954 (+) True LOC110528958
TU700614 other downstream 3774854 47839388 ~ 47839722 (+) True G615624
TU702226 other downstream 4762293 48826827 ~ 48827227 (+) True G617133
TU703098 other downstream 5507786 49572320 ~ 49620168 (+) False tafa4b

Expression Profile