RNA id: TU696189



Basic Information


Item Value
RNA id TU696189
length 206
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G611489
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 44205461 ~ 44205666 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GAATTAATACATCCCTGCAGAAAGGATTATTGCTCTCTGAATGTCCCCAGCTAACACACCATATATGAGTTTATCATTGCATAACTTTAGAATAAGCATTGTTTTAGATGTGAATCTCATTTAGTCATGCTGTCACTAAGATACCATCCCACATCAAAGAAAATTCATTCAATCCAATGGCTTTTCAAACACTGTCTCTGTAGGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU696186 lncRNA downstream 4616 44200548 ~ 44200845 (-) True G611486
TU696170 lncRNA downstream 13932 44188845 ~ 44191529 (-) True G611470
TU696169 lncRNA downstream 26724 44136185 ~ 44178737 (-) True LOC110527840
TU696122 lncRNA downstream 170617 44034496 ~ 44034844 (-) True G611423
TU695960 lncRNA downstream 436870 43768358 ~ 43768591 (-) True G611275
TU696199 lncRNA upstream 17785 44223451 ~ 44223726 (-) True G611499
TU696202 lncRNA upstream 21779 44227445 ~ 44227686 (-) True G611502
TU696208 lncRNA upstream 29551 44235217 ~ 44235521 (-) True G611508
TU696290 lncRNA upstream 139711 44345377 ~ 44373823 (-) True G611580
TU696303 lncRNA upstream 145045 44350711 ~ 44351469 (-) True G611591
XM_036983312.1 mRNA downstream 21257 44178431 ~ 44184204 (-) False LOC110527840
XM_021609386.2 mRNA downstream 21267 44178431 ~ 44184194 (-) False LOC110527840
XM_021609381.2 mRNA downstream 29370 44163371 ~ 44176091 (-) False si:dkeyp-61b2.1
XM_021609388.2 mRNA upstream 55962 44261628 ~ 44269305 (-) True prxl2b
XM_021609397.2 mRNA upstream 85597 44291263 ~ 44294096 (-) True si:ch211-222l21.1
XM_021609398.2 mRNA upstream 109837 44315503 ~ 44320470 (-) True LOC110527846
XM_021609418.2 mRNA upstream 380644 44586310 ~ 44590398 (-) False ghrh
XM_021609419.2 mRNA upstream 380644 44586310 ~ 44590398 (-) True ghrh
TU695139 other downstream 625497 43579093 ~ 43579964 (-) True G610570
TU695151 other downstream 668496 43526691 ~ 43536965 (-) False LOC110527816
TU696390 other upstream 279189 44484855 ~ 44485405 (-) False G611674
TU696391 other upstream 279189 44484855 ~ 44485752 (-) False G611674
TU698246 other upstream 1669299 45874965 ~ 45875700 (-) True G613411
TU700211 other upstream 3062657 47268323 ~ 47270071 (-) True LOC110527888
TU701964 other upstream 4281381 48487047 ~ 48529168 (-) True G616880

Expression Profile