Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU700241 |
| length | 455 |
| lncRNA type | antisense_over |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G615292 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 47294546 ~ 47295000 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU700196 | lncRNA | upstream | 9793 | 47284506 ~ 47284753 (+) | True | G615247 |
| TU700181 | lncRNA | upstream | 26329 | 47268009 ~ 47268217 (+) | True | G615232 |
| TU700180 | lncRNA | upstream | 27075 | 47267172 ~ 47267471 (+) | True | G615231 |
| TU700179 | lncRNA | upstream | 27545 | 47266669 ~ 47267001 (+) | True | G615230 |
| TU700178 | lncRNA | upstream | 27934 | 47266358 ~ 47266612 (+) | True | G615229 |
| TU700244 | lncRNA | downstream | 1864 | 47296864 ~ 47297215 (+) | True | LOC110527889 |
| TU700305 | lncRNA | downstream | 62958 | 47357958 ~ 47417000 (+) | True | G615353 |
| TU700309 | lncRNA | downstream | 110921 | 47405921 ~ 47406613 (+) | True | G615357 |
| TU700306 | lncRNA | downstream | 111768 | 47406768 ~ 47407292 (+) | True | G615354 |
| TU700299 | lncRNA | downstream | 112726 | 47407726 ~ 47408133 (+) | True | G615347 |
| XM_021609471.2 | mRNA | upstream | 264997 | 46936288 ~ 47029549 (+) | False | sema3fb |
| XM_021609472.2 | mRNA | upstream | 264997 | 46936288 ~ 47029549 (+) | False | sema3fb |
| XM_021609474.2 | mRNA | upstream | 264997 | 46936288 ~ 47029549 (+) | False | sema3fb |
| XM_021609475.2 | mRNA | upstream | 264997 | 46936288 ~ 47029549 (+) | True | sema3fb |
| XM_021609470.2 | mRNA | upstream | 484084 | 46806447 ~ 46810462 (+) | True | bhlhe40 |
| XM_021609480.2 | mRNA | downstream | 1738 | 47296738 ~ 47302095 (+) | False | LOC110527889 |
| XM_021609479.2 | mRNA | downstream | 2243 | 47297243 ~ 47302095 (+) | False | LOC110527889 |
| XM_036983371.1 | mRNA | downstream | 2479 | 47297479 ~ 47302095 (+) | False | LOC110527889 |
| XM_036983380.1 | mRNA | downstream | 216000 | 47511000 ~ 47524578 (+) | False | LOC110527899 |
| XM_021609498.2 | mRNA | downstream | 216001 | 47511001 ~ 47524578 (+) | False | LOC110527899 |
| TU699203 | other | upstream | 656592 | 46632122 ~ 46637954 (+) | True | LOC110528958 |
| TU698525 | other | upstream | 1015213 | 46278734 ~ 46279333 (+) | True | G613664 |
| TU695458 | other | upstream | 3266318 | 44021849 ~ 44028228 (+) | True | si:dkey-264d12.5 |
| TU695454 | other | upstream | 3287639 | 44002624 ~ 44006907 (+) | False | si:dkey-264d12.5 |
| TU695211 | other | upstream | 3462666 | 43829004 ~ 43831880 (+) | False | G610622 |
| TU700614 | other | downstream | 544388 | 47839388 ~ 47839722 (+) | True | G615624 |
| TU702226 | other | downstream | 1531827 | 48826827 ~ 48827227 (+) | True | G617133 |
| TU703098 | other | downstream | 2277320 | 49572320 ~ 49620168 (+) | False | tafa4b |
| TU703100 | other | downstream | 2291870 | 49586870 ~ 49620168 (+) | True | tafa4b |
| TU703948 | other | downstream | 3008430 | 50303430 ~ 50304232 (+) | True | G618712 |
