RNA id: TU704341


Basic Information

Item Value
RNA id TU704341
length 208
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G619090
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 50448952 ~ 50449159 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

atgggggcgtgttcggtcctccgtttcctgtagtccacaatcatctcctttgtcttgctcactttgagggagaggttgttgtcctggcaccacatgaccaggtctctgacctcctccctatacgctgtctcatcgttgtcagtgatcaggcctaccactgttgtttcatctgcaaacttaatgatggtgttggagactGAGAAAGCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU704335 lncRNA downstream 6877 50441856 ~ 50442075 (-) True G619084
TU704332 lncRNA downstream 7326 50437433 ~ 50441626 (-) True G619081
TU704285 lncRNA downstream 81748 50366994 ~ 50367204 (-) True G619037
TU704210 lncRNA downstream 95608 50353127 ~ 50353344 (-) True G618969
TU704204 lncRNA downstream 98070 50350593 ~ 50350882 (-) True G618963
TU704349 lncRNA upstream 8722 50457881 ~ 50458162 (-) True G619098
TU704377 lncRNA upstream 40265 50489424 ~ 50489644 (-) True G619126
TU704599 lncRNA upstream 60265 50509424 ~ 50510041 (-) True LOC110528963
TU704628 lncRNA upstream 101701 50550860 ~ 50558973 (-) True G619353
TU704759 lncRNA upstream 255923 50705082 ~ 50798597 (-) True G619478
XM_021609616.2 mRNA downstream 142674 50300364 ~ 50306278 (-) False LOC110527964
XM_021609615.2 mRNA downstream 148815 50279611 ~ 50300137 (-) True LOC110527963
XM_021609612.2 mRNA downstream 512377 49660022 ~ 49936575 (-) False LOC110527961
XR_005052596.1 mRNA downstream 512390 49666452 ~ 49936562 (-) False LOC110527961
XR_005052595.1 mRNA downstream 512393 49660022 ~ 49936559 (-) False LOC110527961
LOC110528963 mRNA upstream 60314 50509473 ~ 50540585 (-) False LOC110528963
XR_005052597.1 mRNA upstream 488050 50937209 ~ 50939964 (-) True LOC118965294
XR_005052598.1 mRNA upstream 638130 51087289 ~ 51091164 (-) False LOC118965295
XR_005052599.1 mRNA upstream 638130 51087289 ~ 51091164 (-) True LOC118965295
XM_021609626.2 mRNA upstream 648298 51097457 ~ 51112064 (-) False LOC110527971
TU704151 other downstream 142796 50304448 ~ 50306156 (-) True LOC110527964
TU703492 other downstream 512671 49660035 ~ 49936281 (-) False LOC110527961
TU702832 other downstream 1151704 49295255 ~ 49297248 (-) True mustn1b
TU702811 other downstream 1252982 49195604 ~ 49195970 (-) True G617632
TU702803 other downstream 1262856 49184424 ~ 49186096 (-) True G617624
TU705034 other upstream 507112 50956271 ~ 50958540 (-) True G619733
TU708601 other upstream 2856377 53305536 ~ 53322831 (-) True G622985
TU711185 other upstream 4623320 55072479 ~ 55075396 (-) True G625426
TU711245 other upstream 4715333 55164492 ~ 55172200 (-) False G625472
TU711411 other upstream 4984297 55433456 ~ 55434072 (-) True LOC110528020

Expression Profile